Publications

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Submitted
McKeown R, Feldman NH, Lidz J, Boyd-Graber J.  Submitted.  Discovering Pronoun Categories using Discourse Information. Proceedings of the 35th Annual Conference of the Cognitive Science Society.
2018
Cheng H-C, Cardone A, Jain S, Krokos E, Narayan K, Subramaniam S, Varshney A.  2018.  Deep-learning-assisted Volume Visualization. IEEE Transactions on Visualization and Computer Graphics. :1-1.
Connelly S, Subramanian P, Hasan NA, Colwell RR, Kaleko M.  2018.  Distinct consequences of amoxicillin and ertapenem exposure in the porcine gut microbiome. Anaerobe. 53:82-93.
2017
Cheng H-C, Cardone A, Krokos E, Stoica B, Faden A, Varshney A.  2017.  Deep-learning-assisted visualization for live-cell images. IEEE International Conference on Image Processing.
2015
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Cardone A, Bornstein A, Pant HC, Brady M, Sriram R, Hassan SA.  2015.  Detection and characterization of nonspecific, sparsely populated binding modes in the early stages of complexation.. J Comput Chem.
Jutla A, Huq A, Colwell RR.  2015.  Diagnostic Approach for Monitoring Hydroclimatic Conditions Related to Emergence of West Nile Virus in West Virginia. Frontiers in Public Health.
Nasr-Azadani F, Unnikrishnan A, Akanda A, Islam S, Alam M, Huq A, Jutla A, Colwell RR.  2015.  Downscaling river discharge to assess the effects of climate change on cholera outbreaks in the Bengal Delta. Climate Research. 64(3):257-274.
2013
Kumar J, Ye P, Doermann D.  2013.  A Dataset for Quality Assessment of Camera Captured Document Images.
Rashid A, Haley BJ, Rajabov M, Ahmadova S, Gurbanov S, Colwell RR, Huq A.  2013.  Detection of Vibrio cholerae in environmental waters including drinking water reservoirs of Azerbaijan. Environmental Microbiology Reports. (1):30-38.
Nguyen V-A, Boyd-Graber J, Altschul SF.  2013.  Dirichlet Mixtures, the Dirichlet Process, and the Structure of Protein Space. Journal of Computational Biology. 20PDF icon cmb%2E2012%2E0244.pdf (292.43 KB)
Wang Y-C, Khan Z, Wieschaus E F..  2013.  Distinct Rap1 Activity States Control the Extent of Epithelial Invagination via α-Catenin. Developmental Cell. 25(3):299-309.
Hasan NA, Ceccarelli D, Grim CJ, Taviani E, Choi J, Sadique A, Alam M, Siddique AK, R. Sack B, Huq A et al..  2013.  Distribution of Virulence Genes in Clinical and Environmental Vibrio cholerae Strains in Bangladesh. Applied and Environmental Microbiology. (18):5782-5785.
Ye P, Doermann D.  2013.  Document Image Quality Assessment: A Brief Survey. International Conference on Document Analysis and Recognition (ICDAR).
Chomvarin C., Johura F.-T., Mannan S.B, Jumroenjit W., Kanoktippornchai B., Tangkanakul W., Tantisuwichwong N., Huttayananont S., Watanabe H., Hasan N.A et al..  2013.  Drug response and genetic properties of Vibrio cholerae associated with endemic cholera in north-eastern Thailand, 2003-2011. Journal of Medical Microbiology. :599-609.
2012
Liu B, Faller LL, Klitgord N, Mazumdar V, Ghodsi M, Sommer DD, Gibbons TR, Treangen TJ, Chang YC, Li S.  2012.  Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease. PloS one. 7(6)
Han B, Davis LS.  2012.  Density-Based Multifeature Background Subtraction with Support Vector Machine. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 34(5):1017-1023.
Froehlich J, Findlater L, Ostergren M, Ramanathan S, Peterson J, Wragg I, Larson E, Fu F, Bai M, Patel S.  2012.  The design and evaluation of prototype eco-feedback displays for fixture-level water usage data. :2367-2376.
Shen C-C, Wu S, Sane N, Wu H-H, Plishker W, Bhattacharyya SS.  2012.  Design and Synthesis for Multimedia Systems Using the Targeted Dataflow Interchange Format. IEEE Transactions on Multimedia. 14(3):630-640.
Huq A, Haley BJ, Taviani E, Chen A, Hasan NA, Colwell RR.  2012.  Detection, Isolation, and Identification of Vibrio cholerae from the Environment. Current Protocols in Microbiology. 26(1)
Fushman D.  2012.  Determining Protein Dynamics from 15N Relaxation Data by Using DYNAMICS. Protein NMR Techniques. 831:485-511.
Patel VM, Wu T, Biswas S, Phillips P, Chellappa R.  2012.  Dictionary-based Face Recognition Under Variable Lighting and Pose. IEEE Transactions on Information Forensics and Security. PP(99):1-1.
Wang Y-C, Khan Z, Kaschube M, Wieschaus EF.  2012.  Differential positioning of adherens junctions is associated with initiation of epithelial folding. Nature. 484(7394):390-393.
De Floriani L, Čomić L.  2012.  Dimension-independent multi-resolution morse complexes. Computers & Graphics.
Larson E, Froehlich J, Campbell T, Haggerty C, Atlas L, Fogarty J, Patel SN.  2012.  Disaggregated water sensing from a single, pressure-based sensor: An extended analysis of HydroSense using staged experiments. Pervasive and Mobile Computing. 8(1):82-102.

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