Publications

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2012
Larson E, Froehlich J, Campbell T, Haggerty C, Atlas L, Fogarty J, Patel SN.  2012.  Fast track article: Disaggregated water sensing from a single, pressure-based sensor: An extended analysis of HydroSense using staged experiments. Pervasive Mob. Comput.. 8(1):82-102.
Hara K, Le V, Froehlich J.  2012.  A feasibility study of crowdsourcing and google street view to determine sidewalk accessibility. :273-274.
Kelley DR, Liu B, Delcher AL, Pop M, Salzberg SL.  2012.  Gene Prediction with Glimmer for Metagenomic Sequences Augmented by Classification and Clustering. Nucleic Acids ResearchNucl. Acids Res.. 40(1):e9-e9-e9-e9.
Hasan N.A, Choi S.Y, Eppinger M., Clark P.W, Chen A., Alam M., Haley B.J, Taviani E., Hine E., Su Q. et al..  2012.  Genomic diversity of 2010 Haitian cholera outbreak strains. Proceedings of the National Academy of Sciences. :E2010-E2017.
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Blanco MAndres, LeRoy G, Khan Z, Alečković M, Zee BM, Garcia BA, Kang Y.  2012.  Global secretome analysis identifies novel mediators of bone metastasis. Cell Research. 22(9):1339-1355.
Chowdhury S, Svec P, Wang C, Losert W, Gupta SK.  2012.  Gripper synthesis for indirect manipulation of cells using Holographic Optical Tweezers. :2749-2754.
Del Canto F, Botkin DJ, Valenzuela P, Popov V, Ruiz-Perez F, Nataro JP, Levine MM, Stine OC, Pop M, Torres AG et al..  2012.  Identification of Coli Surface Antigen 23, a Novel Adhesin of Enterotoxigenic Escherichia coli. Infection and immunity. 80(8):2791-2801.
Lathia N, Smith C, Froehlich J, Capra L.  2012.  Individuals among commuters: Building personalised transport information services from fare collection systems. Pervasive and Mobile Computing.
Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S et al..  2012.  InterPro in 2011: new developments in the family and domain prediction database.. Nucleic Acids Res. 40(Database issue):D306-12.
Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S et al..  2012.  InterPro in 2011: new developments in the family and domain prediction database.. Nucleic Acids Res. 40(Database issue):D306-12.
Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S et al..  2012.  InterPro in 2011: new developments in the family and domain prediction database.. Nucleic Acids Res. 40(Database issue):D306-12.
Baker K, Bloodgood M, Dorr BJ, Callison-Burch C, Filardo NW, Piatko C, Levin L, Miller S.  2012.  Modality and Negation in SIMT Use of Modality and Negation in Semantically-Informed Syntactic MT. Computational Linguistics. :1-48.
Barrett C, Beckman R, Bisset K, Chen J, DuBois T, Eubank S, Kumar AVS, Lewis B, Marathe MV, Srinivasan A et al..  2012.  Optimizing epidemic protection for socially essential workers. Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium. :31-40.
Hwang H, Lauw HW, Getoor L, Ntoulas A.  2012.  Organizing User Search Histories. Knowledge and Data Engineering, IEEE Transactions on. 24(5):912-925.
Li I, Medynskiy Y, Froehlich J, Larsen J.  2012.  Personal informatics in practice: improving quality of life through data. :2799-2802.
Li I, Medynskiy Y, Froehlich J, Larsen J.  2012.  Personal informatics in practice: improving quality of life through data. :2799-2802.
Zhuolin Jiang, Lin Z, Davis LS.  2012.  Recognizing Human Actions by Learning and Matching Shape-Motion Prototype Trees. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 34(3):533-547.
Lai M-Y, Zhang D, LaRonde-LeBlanc N, Fushman D.  2012.  Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research.
Lai M-Y, Zhang D, LaRonde-LeBlanc N, Fushman D.  2012.  Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research.
Martineau J, Mokashi R, Chapman D, Grasso M, Brady M, Yesha Y, Yesha Y, Cardone A, Dima A.  2012.  Sub-cellular feature detection and automated extraction of collocalized actin and myosin regions. the 2nd ACM SIGHIT symposiumProceedings of the 2nd ACM SIGHIT symposium on International health informatics - IHI '12. :399.
Martineau J, Mokashi R, Chapman D, Grasso M, Brady M, Yesha Y, Yesha Y, Cardone A, Dima A.  2012.  Sub-cellular feature detection and automated extraction of collocalized actin and myosin regions. the 2nd ACM SIGHIT symposiumProceedings of the 2nd ACM SIGHIT symposium on International health informatics - IHI '12. :399.
Campbell T, Larson E, Cohn G, Alcaide R, Froehlich J, Patel S.  2012.  Systems and Methods for Energy Harvesting in a Contained Fluid Circuit.
Motiwala M, Dhamdhere A, Feamster N, Lakhina A.  2012.  Towards a cost model for network traffic. SIGCOMM Comput. Commun. Rev.. 42(1):54-60.

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