Publications

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2012
Barrett C, Beckman R, Bisset K, Chen J, DuBois T, Eubank S, Kumar AVS, Lewis B, Marathe MV, Srinivasan A et al..  2012.  Optimizing epidemic protection for socially essential workers. Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium. :31-40.
Bhattacharya R, Chatterjee S, Bhattacharyya SS.  2012.  Preparation and probing of coherent vibrational wave packets in the ground electronic state of HD^{+}. Physical Review A. 85(3)
Bhattacharya R, Chatterjee S, Bhattacharyya SS.  2012.  Preparation and probing of coherent vibrational wave packets in the ground electronic state of HD^{+}. Physical Review A. 85(3)
Sane N, Ford J, Harris AI, Bhattacharyya SS.  2012.  Prototyping scalable digital signal processing systems for radio astronomy using dataflow models. Radio Science. 47(3):n/a-n/a.
Khan Z, Bloom JS, Amini S, Singh M, Perlman DH, Caudy AA, Kruglyak L.  2012.  Quantitative measurement of allele‐specific protein expression in a diploid yeast hybrid by LC‐MS. Molecular Systems Biology. 8(1)
Bloodgood M, Ye P, Rodrigues P, Zajic D, Doermann D.  2012.  A Random Forest System Combination Approach for Error Detection in Digital Dictionaries. Innovative hybrid approaches to the processing of textual data, EACL 2012 Workshop. :78-86.
Rosenzweig R, Bronner V, Zhang D, Fushman D, Glickman MH.  2012.  Rpn1 and Rpn2 coordinate ubiquitin processing factors at the proteasome. Journal of Biological ChemistryJ. Biol. Chem..
Nguyen V-A, Boyd-Graber J, Resnik P.  2012.  SITS: A Hierarchical Nonparametric Model using Speaker Identity for Topic Segmentation in Multiparty Conversations. Association for Computational Linguistics.
Patro R, Dickerson JP, Bista S, Gupta SK, Varshney A.  2012.  Speeding Up Particle Trajectory Simulations under Moving Force Fields using GPUs. Journal of Computing and Information Science in Engineering.
Huttenhower C, Gevers D, Knight R, Abubucker S, Badger JH, Chinwalla AT, Creasy HH, Earl AM, Fitzgerald MG, Fulton RS et al..  2012.  Structure, function and diversity of the healthy human microbiome. Nature. 486:207-214.
Martineau J, Mokashi R, Chapman D, Grasso M, Brady M, Yesha Y, Yesha Y, Cardone A, Dima A.  2012.  Sub-cellular feature detection and automated extraction of collocalized actin and myosin regions. the 2nd ACM SIGHIT symposiumProceedings of the 2nd ACM SIGHIT symposium on International health informatics - IHI '12. :399.
Banakar V, Constantin de Magny G, Jacobs J, Murtugudde R, Huq A, J. Wood R, Colwell RR.  2012.  Temporal and Spatial Variability in the Distribution of Vibrio vulnificus in the Chesapeake Bay: A Hindcast Study. EcoHealth. :1-12.
Eidelman V, Boyd-Graber J, Resnik P.  2012.  Topic Models for Dynamic Translation Model Adaptation. Association for Computational Linguistics.
Chetty M, Banks R, Brush A.J., Donner J, Grinter R.  2012.  You'Re Capped: Understanding the Effects of Bandwidth Caps on Broadband Use in the Home. SIGCHI '12. :3021-3030.
Chetty M, Banks R, Brush A.J., Donner J, Grinter R.  2012.  You'Re Capped: Understanding the Effects of Bandwidth Caps on Broadband Use in the Home. SIGCHI '12. :3021-3030.
2013
Nguyen VA, Hu Y, Boyd-Graber J.  2013.  Argviz: Interactive Visualization of Topic Dynamics in Multi-party Conversations. Human Language Technologies: The 2013 Annual Conference of the North American Chapter of the Association for Computational Linguistics.
Hu Y, Boyd-Graber J, III HDaume, Z Ying I.  2013.  Binary to Bushy: Bayesian Hierarchical Clustering with the Beta Coalescent. :1079-1087.
Nguyen V-A, Boyd-Graber J, Altschul SF.  2013.  Dirichlet Mixtures, the Dirichlet Process, and the Structure of Protein Space. Journal of Computational Biology. 20PDF icon cmb%2E2012%2E0244.pdf (292.43 KB)
Clements JD, Connell ND, Dirks C, El-Faham M, Hay A, Heitman E, Stith JH, Bond EC, Colwell RR, Anestidou L et al..  2013.  Engaging Actively with Issues in the Responsible Conduct of Science: Lessons from International Efforts Are Relevant for Undergraduate Education in the United States. CBE—Life Sciences Education. (4):596-603.
Bozo-Hurtado L, García-Amado M, Chistoserdov A, Varela R, Narvaez J, Colwell RR, Suárez P.  2013.  Identification of bacteria in enrichment cultures of sulfate reducers in the Cariaco Basin water column employing Denaturing Gradient Gel Electrophoresis of 16S ribosomal RNA gene fragments. Aquatic Biosystems. 9(1):17.
Hara K, Azenkot S, Campbell M, Bennett CL, Le V, Pannella S, Moore R, Minckler K, Ng RH, Froehlich J.  2013.  Improving public transit accessibility for blind riders by crowdsourcing bus stop landmark locations with Google street view. The 15th International ACM SIGACCESS Conference. :16-8.
Nguyen V-A, Boyd-Graber J, Resnik P.  2013.  Lexical and Hierarchical Topic Regression. :1106-1114.
Hekler EB, Klasnja P, Froehlich J, Buman MP.  2013.  Mind the Theoretical Gap: Interpreting, Using, and Developing Behavioral Theory in HCI Research. CHI 2013 To Appear.
Nguyen V-A, Boyd-Graber J, Resnik P, Cai DA, Midberry JE, Wang Y.  2013.  Modeling topic control to detect influence in conversations using nonparametric topic models. Machine Learning. :1-41.
Zhai K, Boyd-Graber J.  2013.  Online Latent Dirichlet Allocation with Infinite Vocabulary. International Conference on Machine Learning. PDF icon 2013_icml_infvoc.pdf (985.1 KB)

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