Publications

Bel N, Dorr BJ, Hovy E, Knight K, Iida H, Boitet C, Maegaard B, Wilks Y. 1999. Machine Translation. Multilingual Information Management: Current Levels and Future Abilities. :18-18.

Iwerks GS, Samet H, Smith KP. 2006. Maintenance of K-nn and spatial join queries on continuously moving points. ACM Trans. Database Syst.. 31(2):485-536.

Al-Hebshi NNoor, Baraniya D, Chen T, Hill J, Puri S, Tellez M, Hassan NA, Colwell RR, Ismail A. 2019. Metagenome sequencing-based strain-level and functional characterization of supragingival microbiome associated with dental caries in children. Journal of Oral Microbiology. (118):1557986.

Hasan NA, Young BA, Minard-Smith AT, Saeed K, Li H, Heizer EM, McMillan NJ, Isom R, Abdullah AShakur, Bornman DM et al.. 2014. Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.

Irizarry RA, Corrada Bravo H. 2009. Model-based quality assessment and base-calling for second-generation sequencing data. Johns Hopkins University, Dept. of Biostatistics Working Papers. :184-184.

Rahaman M.Habibur, Islam T, Colwell RR, Alam M. 2015. Molecular tools in understanding the evolution of Vibrio cholerae. Frontiers in Microbiology. (e0120311154e00398-13822020380817190)

Chekuri C, Gal A, Im S, Khuller S, Li J, McCutchen R, Moseley B, Raschid L. 2011. New models and algorithms for throughput maximization in broadcast scheduling. Approximation and Online Algorithms. :71-82.

Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al.. 2014. Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX ⁺ El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.

Steinherz T, Doermann D, Rivlin E, Intrator N. 2009. Off-Line Loop Investigation for Handwriting Analysis. IEEETransactions on Pattern Analysis and Machine Intelligence. 31(2):193-209.

Katz B, Felshin S, Yuret D, Ibrahim A, Jimmy Lin, Marton G, Jerome McFarland A, Temelkuran B. 2002. Omnibase: Uniform access to heterogeneous data for question answering. Natural Language Processing and Information Systems. :230-234.

Cleaveland R, Iyer P, Yankelevich D. 1995. Optimality in abstractions of model checking. Static Analysis. :51-63.

Islam MS, Tasmin R, s l a m Khan SI, Bakht HBM, a y a t Mahmood ZH, i a u r Rahman MZ, m i n Bhuiyan NA, Nishibuchi M, a l a k r i s h Nair GB, r a d l e y Sack RB et al.. 2004. Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh. Canadian Journal of Microbiology. 50(10):827-834.

Miller BP, Callaghan MD, Cargille JM, Hollingsworth J, Irvin RB, Karavanic KL, Kunchithapadam K, Newhall T. 1995. The Paradyn parallel performance measurement tool. Computer. 28(11):37-46.

Apostolico A, Iliopoulos C, Landau GM, Schieber B, Vishkin U. 1988. Parallel construction of a suffix tree with applications. Algorithmica. 3(1):347-365.

Juba D, Cardone A, Ip C Y, Simon Jr CG, K Tison C, Kumar G, Brady M, Varshney A. 2013. Parallel geometric classification of stem cells by their three-dimensional morphology. Computational Science & Discovery. 6(1):015007.

Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al.. 2016. Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)

Hajiaghayi MT, Immorlica N, Mirrokni VS. 2007. Power optimization in fault-tolerant topology control algorithms for wireless multi-hop networks. IEEE/ACM Transactions on Networking (TON). 15(6):1345-1358.

Cleaveland R, Iyer PS, Narasimha M. 2005. Probabilistic temporal logics via the modal mu-calculus. Theoretical Computer Science. 342(2-3):316-350.

Colwell RR, Huq A, Islam SM, Aziz KMA, Yunus M, Khan HN, Mahmud A, Sack BR, Nair GB, Chakraborty J et al.. 2003. Reduction of Cholera in Bangladeshi Villages by Simple Filtration. Proceedings of the National Academy of SciencesPNAS. 100(3):1051-1055.

Ip CY, Gupta SK. 2007. Retrieving matching CAD models by using partial 3D point clouds. Computer-Aided Design & Applications. 4(5):629-638.

Grim CJ, Zo Y-G, Hasan NA, Ali A, Chowdhury WB, Islam A, Rashid MH, Alam M, Morris GJ, Huq A et al.. 2009. RNA Colony Blot Hybridization Method for Enumeration of Culturable Vibrio Cholerae and Vibrio Mimicus Bacteria. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 75(17):5439-5444.

Patro R, Ip CY, Varshney A, Hagen H. 2010. Saliency Guided Summarization of Molecular Dynamics Simulations. Scientific Visualization: Advanced Concepts. 1:321-335.

Ip C Y, Varshney A. 2011. Saliency-Assisted Navigation of Very Large Landscape Images. Visualization and Computer Graphics, IEEE Transactions on. 17(12):1737-1746.

Kim Y, Patro R, Ip CY, O’Leary DP, Anishkin A, Sukharev S, Varshney A. 1998. Salient Frame Detection for Molecular Dynamics Simulations. Scientific Visualization: Interactions, Features, Metaphors. 2:160-175.

Baker K, Bethard S, Bloodgood M, Brown R, Callison-Burch C, Coppersmith G, Dorr BJ, Filardo W, Giles K, Irvine A et al.. 2009. Semantically informed machine translation (SIMT). SCALE summer workshop final report, Human Language Technology Center Of Excellence.

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Publications