Publications

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2009
Langmead B, Trapnell C, Pop M, Salzberg SL.  2009.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology. 10(3):R25-R25.
Tsui C-jung, Wang P, Fleischmann K, Oard D, Sayeed A.  2009.  Understanding IT Innovations Through Computational Analysis of Discourse. ICIS 2009 Proceedings.
Turaga P, Veeraraghavan A, Chellappa R.  2009.  Unsupervised view and rate invariant clustering of video sequences. Computer Vision and Image Understanding. 113(3):353-371.
Chellappa R, Bicego M, Turaga P.  2009.  Video-Based Face Recognition Algorithms. Handbook of Remote Biometrics. :193-216.
2010
Aggarwal G, Panigrahy R, Feder T, Thomas D, Kenthapadi K, Khuller S, Zhu A.  2010.  Achieving anonymity via clustering. ACM Trans. Algorithms. 6(3):49:1–49:19-49:1–49:19.
Jung J H, O'Leary DP, Tits A'L.  2010.  Adaptive Constraint Reduction for Convex Quadratic Programming. Computational Optimization and Applications.
Turaga P, Chellappa R, Veeraraghavan A.  2010.  Advances in Video-Based Human Activity Analysis: Challenges and Approaches. Advances in ComputersAdvances in Computers. Volume 80:237-290.
Papamanthou C, Tollis IG.  2010.  Applications of Parameterized st-Orientations. Journal of Graph Algorithms and Applications. 14(2):337-365.
Gopalan R, Turaga P, Chellappa R.  2010.  Articulation-Invariant Representation of Non-planar Shapes. Computer Vision – ECCV 2010Computer Vision – ECCV 2010. 6313:286-299.
Cummings MP, Temple GG.  2010.  Broader incorporation of bioinformatics in education: opportunities and challenges. Brief Bioinform. 11(537-543)
Tsui C, Wang P, Fleischmann KR, Sayeed AB, Weinberg A.  2010.  Building an IT Taxonomy with Co-occurrence Analysis, Hierarchical Clustering, and Multidimensional Scaling.
Dyer C, Weese J, Setiawan H, Lopez A, Ture F, Eidelman V, Ganitkevitch J, Blunsom P, Resnik P.  2010.  cdec: A decoder, alignment, and learning framework for finite-state and context-free translation models. Proceedings of the ACL 2010 System Demonstrations. :7-12.
Bradd H, Christopher G, Nur H, Seon-Young C, Jongsik C, Thomas B, David B, Jean C, Chris DJ, Cliff H et al..  2010.  Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae. BMC Microbiology. 10
Hasan NA, Grim CJ, Haley BJ, Chun J, Alam M, Taviani E, Hoq M, Munk CA, Colwell RR.  2010.  Comparative Genomics of Clinical and Environmental Vibrio Mimicus. Proceedings of the National Academy of SciencesPNAS. 107(49):21134-21139.
Sankaranarayanan A, Turaga P, Baraniuk R, Chellappa R.  2010.  Compressive Acquisition of Dynamic Scenes. Computer Vision – ECCV 2010Computer Vision – ECCV 2010. 6311:129-142.
Choi JH, Tang H, Kim S, Pop M.  2010.  Computational Approaches for Genome Assembly Validation. Biological Data Mining. :163-163.
Thakur A, Gupta SK.  2010.  A Computational Framework for Real-Time Unmanned Sea Surface Vehicle Motion Simulation. 3:51-61.
Senoh M, Ghosh‐Banerjee J, Ramamurthy T, Hamabata T, Kurakawa T, Takeda M, Colwell RR, Nair BG, Takeda Y.  2010.  Conversion of viable but nonculturable Vibrio cholerae to the culturable state by co‐culture with eukaryotic cells. Microbiology and Immunology. 54(9):502-507.
Senoh M, Ghosh‐Banerjee J, Ramamurthy T, Hamabata T, Kurakawa T, Takeda M, Colwell RR, Nair BG, Takeda Y.  2010.  Conversion of viable but nonculturable Vibrio cholerae to the culturable state by co‐culture with eukaryotic cells. Microbiology and Immunology. 54(9):502-507.
Feamster N, Nayak A, Kim H, Clark R, Mundada Y, Ramachandran A, bin Tariq M.  2010.  Decoupling policy from configuration in campus and enterprise networks. Local and Metropolitan Area Networks (LANMAN), 2010 17th IEEE Workshop on. :1-6.
Taviani E, Grim CJ, Choi J, Chun J, Haley B, Hasan NA, Huq A, Colwell RR.  2010.  Discovery of novel Vibrio cholerae VSP‐II genomic islands using comparative genomic analysis. FEMS Microbiology Letters. 308(2):130-137.
Bhattacharyya SS, Deprettere EF, Keinert J.  2010.  Dynamic and Multidimensional Dataflow Graphs. Handbook of Signal Processing Systems. :899-930.
Oard D, Baron JR, Hedin B, Lewis DD, Tomlinson S.  2010.  Evaluation of information retrieval for E-discovery. Artificial Intelligence and Law. 18:347-386.
Sopan A, Freire M, Taieb-Maimon M, Golbeck J, Shneiderman B.  2010.  Exploring distributions: design and evaluation. University of Maryland, Human-Computer Interaction Lab Tech Report HCIL-2010-01.
Tsui C-jung, Wang P, Fleischmann KR, Oard D, Sayeed AB.  2010.  Exploring the Relationships among ICTs: A Scalable Computational Approach Using KL Divergence and Hierarchical Clustering. Hawaii International Conference on System Sciences. :1-10.

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