Publications

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Journal Articles
Pickart CM, Fushman D.  2004.  Polyubiquitin chains: polymeric protein signals. Current Opinion in Chemical Biology. 8(6):610-616.
Kurkulos M, Weinberg JM, Pepling ME, Mount SM.  1991.  Polyadenylylation in copia requires unusually distant upstream sequences. Proceedings of the National Academy of SciencesPNAS. 88(8):3038-3042.
Arkin E, Goodrich M, Mitchell J, Mount D, Piatko C, Skiena S.  1993.  Point probe decision trees for geometric concept classes. Algorithms and Data Structures. :95-106.
Memon AM, Pollack ME, Soffa ML.  2000.  A planning-based approach to GUI testing. Proceedings of The 13th International Software/Internet Quality Week.
Potter R, Shneiderman B.  1999.  Pixel Data Access for End-User Programming and Graphical Macros. Technical Reports from UMIACS.
Seshadri A, Luk M, Elaine Shi, Perrig A, van Doorn L, Khosla P.  2005.  Pioneer: verifying code integrity and enforcing untampered code execution on legacy systems. ACM SIGOPS Operating Systems Review. 39(5):1-16.
García-Varela M, Pérez-Ponce de León G, de la Torre P, Cummings MP, Sarma SS, Laclette JP.  2000.  Phylogenetic relationships of Acanthocephala based on analysis of 18S ribosomal RNA gene sequences. J Mol Evol. 50(6):532-540.
Cummings MP, Nugent JM, Olmstead RG, Palmer JD.  2003.  Phylogenetic analysis reveals five independent transfers of the chloroplast gene ıt rbcL to the mitochondrial genome in angiosperms. Curr Genet. 43(2):131-138.
García-Varela M, Cummings MP, Pérez-Ponce de León G, Gardner SL, Laclette JP.  2002.  Phylogenetic analysis based on 18S ribosomal RNA gene sequences supports the existence of class Polyacanthocephala (Acanthocephala). Mol Phylogenet Evol. 23(2):288-292.
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Shneiderman B, Kang H, Kules B, Plaisant C, Rose A, Rucheir R.  2002.  A photo history of SIGCHI: evolution of design from personal to public. interactions. 9(3):17-23.
Chang XC, Paige CC, Stewart G.W.  1997.  Perturbation analysis for the QR decomposition. SIAM Journal on Matrix Analysis and Applications. 18:775-791.
Pruzzo C, Tarsi R, Del Mar Lleò M, Signoretto C, Zampini M, Pane L, Colwell RR, Canepari P.  2003.  Persistence of adhesive properties in Vibrio cholerae after long‐term exposure to sea water. Environmental Microbiology. 5(10):850-858.
Pruzzo C, Tarsi R, Del Mar Lleò M, Signoretto C, Zampini M, Pane L, Colwell RR, Canepari P.  2003.  Persistence of adhesive properties in Vibrio cholerae after long‐term exposure to sea water. Environmental Microbiology. 5(10):850-858.
Hussein M, Porikli F, Davis LS.  2009.  PERCEPTION AND NAVIGATION FOR AUTONOMOUS VEHICLES. IEEE Transactions on intelligent transportation systems. 10(3):417-427.
Pruzzo C, Huq A, Colwell RR, Donelli G.  2005.  Pathogenic Vibrio species in the marine and estuarine environment. Oceans and health: pathogens in the marine environment. :217-252.
Brown DG, Page S, Riolo R, Zellner M, Rand W.  2005.  Path dependence and the validation of agent‐based spatial models of land use. International Journal of Geographical Information Science. 19(2):153-174.
Corresponding DGB, Page S, Riolo R, Zellner M, Rand W.  2005.  Path dependence and the validation of agent-based spatial models of land use. International Journal of Geographical Information Science. 19(2):153-174.
Papageorge P, McCann J, Hicks MW.  2009.  Passive aggressive measurement with MGRP. SIGCOMM Comput. Commun. Rev.. 39(4):279-290.
Nirkhe V, Pugh W.  1993.  A partial evaluator for the Maruti hard real-time system. Real-Time Systems. 5(1):13-30.
Sussman A, Saltz J, Das R, Gupta S, Mavriplis D, Ponnusamy R, Crowley K.  1992.  PARTI primitives for unstructured and block structured problems. Computing Systems in Engineering. 3(1-4):73-86.
Papamanthou C, Paparrizos K, Samaras N.  2005.  A parametric visualization software for the assignment problem. Yugoslav Journal of Operations Research. 15(1):147-158.
Papamanthou C, Paparrizos K, Samaras N.  2005.  A parametric visualization software for the assignment problem. Yugoslav Journal of Operations Research. 15(1):147-158.
Gerber R, Pugh W, Saksena M.  1995.  Parametric dispatching of hard real-time tasks. IEEE Transactions on ComputersIEEE Trans. Comput.. 44(3):471-479.
Nagarajan N, Pop M.  2009.  Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing. Journal of Computational Biology. 16(7):897-908.

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