Publications

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Journal Articles
El-Sayed NM, Patton CL, Harkins PC, Fox RO, Anderson K.  1995.  Crystallization and preliminary X-ray investigation of the recombinant Trypanosoma brucei rhodesiense calmodulin. Proteins: Structure, Function, and Bioinformatics. 21(4):354-357.
Essien K, Vigneau S, Apreleva S, Singh LN, Bartolomei MS, Hannenhalli S.  2009.  CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features. Genome Biology. 10(11):R131-R131.
Jim T, Morrisett G, Grossman D, Hicks MW, Cheney J, Wang Y.  2002.  Cyclone: A safe dialect of C. USENIX Annual Technical Conference. :275-288.
Grossman D, Hicks MW, Jim T, Morrisett G.  2005.  Cyclone: A type-safe dialect of C. C/C++ Users Journal. 23(1):112-139.
Grossman D, Morrisett G, Jim T, Hicks MW, Wang Y, Cheney J.  2001.  Cyclone User's Manual, Version 0.1. 3. Computer Science Technical Reports.
Balazinska M, Deshpande A, Franklin MJ, Gibbons PB, Gray J, Hansen M, Liebhold M, Nath S, Szalay A, Tao V.  2007.  Data Management in the Worldwide Sensor Web. IEEE Pervasive Computing. 6(2):30-40.
Kolda T, Brown D, Corones J, Critchlow T, Eliassi-Rad T, Getoor L, Hendrickson B, Kumar V, Lambert D, Matarazzo C.  2004.  Data sciences technology for homeland security information management and knowledge discovery. Report of the DHS Workshop Data Sciences, Jointly Released by Sandia National Laboratories and Lawrence Livermore National Laboratory, Alexandria, Va.
Sen M, Corretjer I, Haim F, Saha S, Schlessman J, Lv T, Bhattacharyya SS, Wolf W.  2007.  Dataflow-based mapping of computer vision algorithms onto FPGAs. EURASIP Journal on Embedded Systems. 2007(1):29-29.
Hoel EG, Samet H.  2003.  Data-parallel polygonization. Parallel Computing. 29(10):1381-1401.
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Everett L, Wang L-S, Hannenhalli S.  2006.  Dense Subgraph Computation Via Stochastic Search: Application to Detect Transcriptional Modules. BioinformaticsBioinformatics. 22(14):e117-e123-e117-e123.
Saha B, Hoch A, Khuller S, Raschid L, Zhang XN.  2010.  Dense Subgraphs with Restrictions and Applications to Gene Annotation Graphs. Research in Computational Molecular Biology. :456-472.
Han B, Davis LS.  2012.  Density-Based Multifeature Background Subtraction with Support Vector Machine. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 34(5):1017-1023.
Bredin JL, Demaine ED, Hajiaghayi MT, Rus D.  2010.  Deploying sensor networks with guaranteed fault tolerance. IEEE/ACM Transactions on Networking (TON). 18(1):216-228.
Carr D, Plaisant C, Hasegawa H.  1998.  The Design of a Telepathology Workstation: Exploring Remote Images. Technical Reports of the Computer Science Department.
Druin A, Bederson BB, Hourcade JP, Sherman L, Revelle G, Platner M, Weng S.  2003.  Designing a digital library for young children: An intergenerational partnership. The craft of information visualization: readings and reflections. 178
Carr D, Plaisant C, Hasegawa H.  1998.  Designing a real-time telepathology workstation to mitigate communication delays. Interacting with Computers. 11(1):33-52.
Helman D, JaJa JF.  1999.  Designing practical efficient algorithms for symmetric multiprocessors. Algorithm Engineering and Experimentation. :663-663.
Oard D, Doermann D, Dorr BJ, He D, Resnik P, Weinberg A, Byrne W, Khudanpur S, Yarowsky D, Leuski A et al..  2003.  Desparately seeking cebuano. Third Conference on Human Language Technologies.
Cardone A, Bornstein A, Pant HC, Brady M, Sriram R, Hassan SA.  2015.  Detection and characterization of nonspecific, sparsely populated binding modes in the early stages of complexation.. J Comput Chem.
Huq A, Haley BJ, Taviani E, Chen A, Hasan NA, Colwell RR.  2012.  Detection, Isolation, and Identification of Vibrio cholerae from the Environment. Current Protocols in Microbiology. 26(1)

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