Publications

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2019
Al-Hebshi NNoor, Baraniya D, Chen T, Hill J, Puri S, Tellez M, Hassan NA, Colwell RR, Ismail A.  2019.  Metagenome sequencing-based strain-level and functional characterization of supragingival microbiome associated with dental caries in children. Journal of Oral Microbiology. (118):1557986.
2018
Sultana M, Nusrin S, Hasan NA, Sadique A, Ahmed KU, Islam A, Hossain A, Longini I, Nizam A, Huq A et al..  2018.  Biofilms Comprise a Component of the Annual Cycle of Vibrio cholerae in the Bay of Bengal Estuary. mBio. (2):e00483-18.
Hossain M, Alam M, Khaleque A, Islam S, Sadique A, Khan N, Halim Z, Sarker M, El-Sayed NM, Huq A et al..  2018.  Virulence-Related Genes Identified from the Genome Sequence of the Non-O1/Non-O139 Vibrio cholerae Strain VcN1, Isolated from Dhaka, Bangladesh. Genome Announcements. (10)
2016
Ponnusamy D, Kozlova EV, Sha J, Erova TE, Azar SR, Fitts EC, Kirtley ML, Tiner BL, Andersson JA, Grim CJ et al..  2016.  Cross-talk among flesh-eating Aeromonas hydrophila strains in mixed infection leading to necrotizing fasciitis. Proceedings of the National Academy of Sciences. 11312161268(3321029):722-727.
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
2015
Nasr-Azadani F, Unnikrishnan A, Akanda A, Islam S, Alam M, Huq A, Jutla A, Colwell RR.  2015.  Downscaling river discharge to assess the effects of climate change on cholera outbreaks in the Bengal Delta. Climate Research. 64(3):257-274.
Rahaman M.Habibur, Islam T, Colwell RR, Alam M.  2015.  Molecular tools in understanding the evolution of Vibrio cholerae. Frontiers in Microbiology. (e0120311154e00398-13822020380817190)
2014
Hasan NA, Young BA, Minard-Smith AT, Saeed K, Li H, Heizer EM, McMillan NJ, Isom R, Abdullah AShakur, Bornman DM et al..  2014.  Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.
Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al..  2014.  Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX + El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.
2013
Hu Y, Boyd-Graber J, III HDaume, Z Ying I.  2013.  Binary to Bushy: Bayesian Hierarchical Clustering with the Beta Coalescent. :1079-1087.
Juba D, Cardone A, Ip C Y, Simon Jr CG, K Tison C, Kumar G, Brady M, Varshney A.  2013.  Parallel geometric classification of stem cells by their three-dimensional morphology. Computational Science & Discovery. 6(1):015007.
Jutla A, Akanda AShafqat, Huq A, Faruque ASyed Golam, Colwell RR, Islam S.  2013.  A water marker monitored by satellites to predict seasonal endemic cholera. Remote Sensing Letters. 4472741982394456(8):822-831.
2012
Rashed S.M, Mannan S.B, Johura F.-T., Islam M.T, Sadique A., Watanabe H., Sack R.B, Huq A., Colwell RR, Cravioto A. et al..  2012.  Genetic characteristics of drug-resistant Vibrio cholerae O1 causing endemic cholera in Dhaka, 2006-2011. Journal of Medical Microbiology. :1736-1745.
Alam M, Islam TM, Rashed S M, Johura F-T, Bhuiyan NA, Delgado G, Morales R, Mendez J L, Navarro A, Watanabe H et al..  2012.  Vibrio Cholerae Classical Biotype Strains Reveal Distinct Signatures in Mexico. Journal of Clinical Microbiology.
Haley BJ, Chen A, Grim CJ, Clark P, Diaz CM, Taviani E, Hasan NA, Sancomb E, Elnemr WM, Islam MA et al..  2012.  Vibrio cholerae in a historically cholera-free country. Environmental Microbiology Reports. (4):381-389.
Song Z, Ismael S, Grimes S, Doermann D, Strassel S.  2012.  Linguistic Resources for Handwriting Recognition and Translation Evaluation. Eight International Conference on Language Resources and Evaluation (LREC'12).
2011
Ishai Y, Katz J, Kushilevitz E, Lindell Y, Petrank E.  2011.  On Achieving the" Best of Both Worlds" in Secure Multiparty Computation. SIAM Journal on Computing. 40(1):122-122.
Dachman-Soled D, Lindell Y, Mahmoody M, Malkin T.  2011.  On the Black-Box Complexity of Optimally-Fair Coin Tossing. Theory of Cryptography. :450-467.
Alam M, Islam A, Bhuiyan NA, Rahim N, Hossain A, Khan GY, Ahmed D, Watanabe H, Izumiya H, Faruque ASG et al..  2011.  Clonal transmission, dual peak, and off-season cholera in Bangladesh. Infection Ecology & Epidemiology. 1(1)
Alam M, Islam A, Bhuiyan NA, Rahim N, Hossain A, Khan GY, Ahmed D, Watanabe H, Izumiya H, Faruque ASG et al..  2011.  Clonal transmission, dual peak, and off-season cholera in Bangladesh. Infection Ecology & Epidemiology. 1(1)
Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Celià-Terrassa T, Mercatali L, Khan Z, Goodarzi H, Hua Y et al..  2011.  Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization. Nature Medicine. 17(9):1101-1108.
Lam H, Bertini E, Isenberg P, Plaisant C, Carpendale S.  2011.  Empirical Studies in Information Visualization: Seven Scenarios. Visualization and Computer Graphics, IEEE Transactions on. PP(99):1-1.
Elaine Shi, Niu Y, Jakobsson M, Chow R.  2011.  Implicit Authentication through Learning User Behavior. Information Security. 6531:99-113.
Patro R, Ip C Y, Bista S, Cho SS, Thirumalai D, Varshney A.  2011.  MDMap: A system for data-driven layout and exploration of molecular dynamics simulations. Biological Data Visualization (BioVis), 2011 IEEE Symposium on. :111-118.
Chekuri C, Gal A, Im S, Khuller S, Li J, McCutchen R, Moseley B, Raschid L.  2011.  New models and algorithms for throughput maximization in broadcast scheduling. Approximation and Online Algorithms. :71-82.

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