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Caragea GC, Keceli F, Tzannes A, Vishkin U.  2010.  General-purpose vs. gpu: Comparison of many-cores on irregular workloads. Proceedings of the Second Usenix Workshop on Hot Topics in Parallelism. :14-15.
Varshney A, Agarwal PK, Brooks Jr FP, Wright WV, Weber H.  1995.  Generating levels of detail for large-scale polygonal models. CS-1995-20
Clayton C, Adams M, Almeida R, Baltz T, Barrett M, Bastien P, Belli S, Beverley S, Biteau N, Blackwell J et al..  1998.  Genetic nomenclature for Trypanosoma and Leishmania.. Mol Biochem Parasitol. 97(1-2):221-4.
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL et al..  2002.  Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature. 419(6906):512-519.
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL et al..  2002.  Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature. 419(6906):512-519.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease. Science. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma Cruzi, Etiologic Agent of Chagas Disease. ScienceScience. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease. Science. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma Cruzi, Etiologic Agent of Chagas Disease. ScienceScience. 309(5733):409-415.
Lewinski MK, Bisgrove D, Shinn P, Chen H, Hoffmann C, Hannenhalli S, Verdin E, Berry CC, Ecker JR, Bushman FD.  2005.  Genome-Wide Analysis of Chromosomal Features Repressing Human Immunodeficiency Virus Transcription. Journal of VirologyJ. Virol.. 79(11):6610-6619.
Yang S, Wang K, Valladares O, Hannenhalli S, Bucan M.  2007.  Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex. Genome Biology. 8(11):R247-R247.
Vishnoi A, Sethupathy P, Simola D, Plotkin JB, Hannenhalli S.  2011.  Genome-Wide Survey of Natural Selection on Functional, Structural, and Network Properties of Polymorphic Sites in Saccharomyces Paradoxus. Molecular Biology and EvolutionMol Biol Evol. 28(9):2615-2627.
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Freedman MJ, Vutukuru M, Feamster N, Balakrishnan H.  2005.  Geographic locality of IP prefixes. Proceedings of the 5th ACM SIGCOMM conference on Internet Measurement. :13-13.
Lee CH, Hao X, Varshney A.  2006.  Geometry-dependent lighting. Visualization and Computer Graphics, IEEE Transactions on. 12(2):197-207.
Hao X, Varshney A.  2006.  Geometry-guided computation of 3D electrostatics for large biomolecules. Computer Aided Geometric Design. 23(6):545-557.
Bista S, Varshney A.  2010.  Global Contours. CS-TR-4957
Pruzzo C, Vezzulli L, Colwell RR.  2008.  Global impact of Vibrio cholerae interactions with chitin. Environmental Microbiology. 10(6):1400-1410.
Garg R, Varna AL, M. Wu.  2010.  Gradient descent approach for secure localization in resource constrained wireless sensor networks. Acoustics Speech and Signal Processing (ICASSP), 2010 IEEE International Conference on. :1854-1857.
Gordon S, Katz J, Vaikuntanathan V.  2010.  A group signature scheme from lattice assumptions. Advances in Cryptology-ASIACRYPT 2010. :395-412.
Varshney A.  2001.  Guest Editor's Introduction: Special Issue on Visualization 2000. IEEE Transactions on Visualization and Computer Graphics. 7(3):193-194.
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Chang CF, Varshney A, Ge QJ.  2001.  Haptic and aural rendering of a virtual milling process. ASME 2001 Design Engineering Technical Conference and Computers and Information in Engineering Conference, Pittsburgh, PA. :105-113.
Kalluri SNV, Zhang Z, JaJa JF, Bader DA, Song H, El Saleous N, Vermote E, Townshend JRG.  1999.  A hierarchical data archiving and processing system to generate custom tailored products from AVHRR data. Geoscience and Remote Sensing Symposium, 1999. IGARSS '99 Proceedings. IEEE 1999 International. 5:2374-2376vol.5-2374-2376vol.5.
Chang CF, Varshney A, Ge QJ.  2001.  Hierarchical image-based and polygon-based rendering for large-scale visualizations. Hierarchical and Geometrical Methods in Scientific VisualizationHierarchical and Geometrical Methods in Scientific Visualization.

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