Publications

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2005
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease. Science. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma Cruzi, Etiologic Agent of Chagas Disease. ScienceScience. 309(5733):409-415.
Lewinski MK, Bisgrove D, Shinn P, Chen H, Hoffmann C, Hannenhalli S, Verdin E, Berry CC, Ecker JR, Bushman FD.  2005.  Genome-Wide Analysis of Chromosomal Features Repressing Human Immunodeficiency Virus Transcription. Journal of VirologyJ. Virol.. 79(11):6610-6619.
El-Osery AI, Baird D, Abd-Almageed W.  2005.  A learning automata based power management for ad-hoc networks. 2005 IEEE International Conference on Systems, Man and Cybernetics. 4:3569-3573Vol.4-3569-3573Vol.4.
Resnik P, Elkiss A.  2005.  The linguist's search engine: an overview. Proceedings of the ACL 2005 on Interactive poster and demonstration sessions. :33-36.
Elman H.  2005.  Preconditioning strategies for models of incompressible flow. Journal of Scientific Computing. 25(1):347-366.
Ouhammouch M, Langham GE, Hausner W, Simpson AJ, El-Sayed NM, Geiduschek PE.  2005.  Promoter architecture and response to a positive regulator of archaeal transcription. Molecular Microbiology. 56(3):625-637.
Salzberg SL, Hotopp J CD, Delcher AL, Pop M, Smith DR, Eisen MB, Nelson WC.  2005.  Serendipitous discovery of Wolbachia genomes in multiple Drosophila species. Genome Biology. 6(3):R23-R23.
Boonyaratanakornkit BB, Simpson AJ, Whitehead TA, Fraser CM, El-Sayed NM, Clark DS.  2005.  Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non‐lethal cold shock. Environmental Microbiology. 7(6):789-797.
Odom J, Hollingsworth J, DeRose L, Ekanadham K, Sbaraglia S.  2005.  Using Dynamic Tracing Sampling to Measure Long Running Programs. Proceedings of the 2005 ACM/IEEE conference on Supercomputing. :59–-59–.
Eaton C, Plaisant C, Drizd T.  2005.  Visualizing missing data: classification and empirical study. Proceedings of INTERACT. :861-872.
Eaton C, Plaisant C, Drizd T.  2005.  Visualizing Missing Data: Graph Interpretation User Study. Human-Computer Interaction - INTERACT 2005. 3585:861-872.
Resnik P, Elkiss A, Lau E, Taylor H.  2005.  The web in theoretical linguistics research: Two case studies using the Linguist’s Search Engine. 31st Meeting of the Berkeley Linguistics Society. :265-276.
Egerstedt M., Balch T, Dellaert F., Delmotte F., Khan Z.  2005.  What Are the Ants Doing? Vision-Based Tracking and Reconstruction of Control Programs Proceedings of the 2005 IEEE International Conference on Robotics and Automation, 2005. ICRA 2005. :4182-4187.
2004
El-Sayed NM, Bartholomeu D, Ivens A, Johnston DA, LoVerde PT.  2004.  Advances in schistosome genomics. Trends in Parasitology. 20(4):154-157.
Kolda T, Brown D, Corones J, Critchlow T, Eliassi-Rad T, Getoor L, Hendrickson B, Kumar V, Lambert D, Matarazzo C.  2004.  Data sciences technology for homeland security information management and knowledge discovery. Report of the DHS Workshop Data Sciences, Jointly Released by Sandia National Laboratories and Lawrence Livermore National Laboratory, Alexandria, Va.
Eaton C, Memon AM.  2004.  Evaluating web page reliability across varied browsing environments. Proceedings of the 15th IEEE International Symposium on Software Reliability Engineering (ISSRE'04).
Eaton C, Memon AM.  2004.  Improving browsing environment compliance evaluations for websites. Proceedings of the International Workshop on Web Quality (WQ'04).
Bringaud F, Biteau N, Zuiderwijk E, Berriman M, El-Sayed NM, Ghedin E, Melville SE, Hall N, Baltz T.  2004.  The ingi and RIME non-LTR retrotransposons are not randomly distributed in the genome of Trypanosoma brucei. Molecular biology and evolution. 21(3):520-520.
Eubank S, Guclu H, Kumar AVS, Marathe MV, Srinivasan A, Toroczkai Z|[aacute]|n, Wang N.  2004.  Modelling disease outbreaks in realistic urban social networks. Nature. 429(6988):180-184.
Shet VD, Prasad VSN, Elgammal A, Yacoob Y, Davis LS.  2004.  Multi-cue exemplar-based nonparametric model for gesture recognition. Indian Conference on Computer Vision, Graphics and Image Processing. :16-18.
Yang C, Duraiswami R, Elgammal A, Davis LS.  2004.  On-Line Kernel-Based Tracking in Joint Feature-Spatial Spaces. IEEE, 0-7695-2158-2164.
Espeland EM, Lipp EK, Huq A, Colwell RR.  2004.  Polylysogeny and prophage induction by secondary infection in Vibrio cholerae. Environmental Microbiology. 6(7):760-763.
Yang C, Duraiswami R, Elgammal A, Davis LS.  2004.  Real-Time Kernel-Based Tracking in Joint Feature-Spatial Spaces. Technical Reports from UMIACS.
LoVerde PT, Hirai H, Merrick JM, Lee NH, El-Sayed NM.  2004.  Schistosoma mansoni genome project: an update. Parasitology International. 53(2):183-192.

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