Publications

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Journal Articles
Vishkin U.  1992.  Methods in parallel algorithmics and who may need to know them? Algorithms and Computation. :1-4.
Vishkin U.  1992.  Methods in parallel algorithmcs. Mathematical Foundations of Computer Science 1992. :81-81.
Florescu D, Raschid L, Valduriez P.  1996.  A methodology for query reformulation in CIS using semantic knowledge. International Journal of Cooperative Information Systems. 5(4):431-468.
Balkan AO, Qu G, Vishkin U.  2009.  Mesh-of-Trees and Alternative Interconnection Networks for Single-Chip Parallelism. Very Large Scale Integration (VLSI) Systems, IEEE Transactions on. 17(10):1419-1432.
Kim Y, Varshney A, Jacobs DW, Guimbretière F.  2010.  Mesh saliency and human eye fixations. ACM Transactions on Applied Perception (TAP). 7(2):12:1–12:13-12:1–12:13.
Lee C H, Varshney A, Jacobs DW.  2005.  Mesh saliency. ACM transactions on graphics. 24(3):659-666.
Faulk S, Gustafson J, Johnson P, Porter A, Tichy W, Votta L.  2004.  Measuring HPC productivity. International Journal of High Performance Computing Applications. 18(4):459-473.
Vegas S, Juristo N, Basili VR.  2009.  Maturing Software Engineering Knowledge through Classifications: A Case Study on Unit Testing Techniques. Software Engineering, IEEE Transactions on. 35(4):551-565.
Eilam-Tzoreff T, Vishkin U.  1988.  Matching patterns in strings subject to multi-linear transformations. Theoretical Computer Science. 60(3):231-254.
Horak MN, Nowick SM, Carlberg M, Vishkin U.  2011.  A Low-Overhead Asynchronous Interconnection Network for GALS Chip Multiprocessors. Computer-Aided Design of Integrated Circuits and Systems, IEEE Transactions on. 30(4):494-507.
Plaisant C, Rose A, Shneiderman B, Vanniamparampil AJ.  1997.  Low-effort, high-payoff user interface reengineering. IEEE Software. 14(4):66-72.
Vezzulli L, Brettar I, Pezzati E, Reid PC, Colwell RR, Höfle MG, Pruzzo C.  2011.  Long-term effects of ocean warming on the prokaryotic community: evidence from the vibrios. The ISME Journal. 6(1):21-30.
Vezzulli L, Brettar I, Pezzati E, Reid PC, Colwell RR, Höfle MG, Pruzzo C.  2012.  Long-term effects of ocean warming on the prokaryotic community: evidence from the vibrios. The ISME Journal. 6111114882511(1):21-30.
Landau GM, Vishkin U, Nussinov R.  1988.  Locating alignments with k differences for nucleotide and amino acid sequences. Computer applications in the biosciences: CABIOS. 4(1):19-19.
Bafna V, Hannenhalli S, Rice K, Vawter L.  2000.  Ligand-Receptor Pairing Via Tree Comparison. Journal of Computational Biology. 7(1-2):59-70.
Voss CR, Dorr BJ, Sencan MU.  1995.  Lexical allocation in interlingua-based machine translation of spatial expressions. Working Notes for IJCAI-95 Workshop on the Representation and Processing of Spatial Expressions, Montreal, Canada.
Zhang Z, JaJa JF, Bader DA, Kalluri SNV, Song H, El Saleous N, Vermote E, Townshend JRG.  2000.  Kronos: A software system for the processing and retrieval of large-scale AVHRR data sets. PE & RS- Photogrammetric Engineering and Remote Sensing. 66(9):1073-1082.
Earl C, Sergey I, Might M, Van Horn D.  2012.  Introspective Pushdown Analysis of Higher-Order Programs. arXiv:1207.1813 [cs].
Baras JS, Ball M, Karne RK, Kelley S, Jang KD, Plaisant C, Roussopoulos N, Stathatos K, Vakhutinsky A, Jaibharat V et al..  1996.  Integrated network management of hybrid networks. AIP Conference Proceedings. 361(1):345-350.
Doermann D, Varma V, Rosenfeld A.  1994.  Instrument Grasp: AModel and its Effects on Handwritten Strokes. Pattern Recognition. 27(2):233-245.
Hussein M, Varshney A, Davis LS.  2007.  On implementing graph cuts on cuda. First Workshop on General Purpose Processing on Graphics Processing Units.
Vishkin U.  1983.  Implementation of simultaneous memory address access in models that forbid it. Journal of algorithms. 4(1):45-50.
Vishkin U.  2008.  An Immediate Concurrent Execution (ICE) Abstraction Proposal for Many-Cores. Computer Science Research Works.
Del Canto F, Botkin DJ, Valenzuela P, Popov V, Ruiz-Perez F, Nataro JP, Levine MM, Stine OC, Pop M, Torres AG et al..  2012.  Identification of Coli Surface Antigen 23, a Novel Adhesin of Enterotoxigenic Escherichia coli. Infection and immunity. 80(8):2791-2801.
Bozo-Hurtado L, García-Amado M, Chistoserdov A, Varela R, Narvaez J, Colwell RR, Suárez P.  2013.  Identification of bacteria in enrichment cultures of sulfate reducers in the Cariaco Basin water column employing Denaturing Gradient Gel Electrophoresis of 16S ribosomal RNA gene fragments. Aquatic Biosystems. 9(1):17.

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