Publications

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Journal Articles
Yilmaz C, Memon AM, Porter A, Krishna AS, Schmidt DC, Gokhale A, Natarajan B.  2004.  Preserving distributed systems critical properties: a model-driven approach. Software, IEEE. 21(6):32-40.
Neamtiu I, Hicks MW, Stoyle G, Oriol M.  2006.  Practical dynamic software updating for C. SIGPLAN Not.. 41(6):72-83.
Mount D, Netanyahu NS, Romanik K, Silverman R, Wu AY.  2007.  A practical approximation algorithm for the LMS line estimator. Computational Statistics & Data Analysis. 51(5):2461-2486.
Navlakha S, Kingsford C.  2010.  The power of protein interaction networks for associating genes with diseases. Bioinformatics. 26(8):1057-1057.
Neumann J, Fermüller C, Aloimonos Y.  2002.  Polydioptric cameras: New eyes for structure from motion. Pattern Recognition. :618-625.
Neumann J, Fermüller C.  2003.  Plenoptic video geometry. The Visual Computer. 19(6):395-404.
Hicks MW, Kakkar P, Moore JT, Gunter CA, Alexander DS, Nettles S.  1998.  The PLAN system for building Active Networks. University of Pennsylvania (February 27, 1998).
Hicks MW, Kakkar P, Moore JT, Gunter CA, Nettles S.  1999.  PLAN: A programming language for active networks. ACM SIGPLAN NOTICES. 34:86-93.
Hicks MW, Kakkar P, Moore JT, Gunter CA, Nettles S.  1998.  PLAN: a packet language for active networks. SIGPLAN Not.. 34(1):86-93.
Cummings MP, Nugent JM, Olmstead RG, Palmer JD.  2003.  Phylogenetic analysis reveals five independent transfers of the chloroplast gene ıt rbcL to the mitochondrial genome in angiosperms. Curr Genet. 43(2):131-138.
Schwartz JP, Norman KL, Shneiderman B.  1985.  Performance on content-free menus as a function of study method. Tech Report HCIL-85-03.
Faruque SM, Kamruzzaman M, Meraj IM, Chowdhury N, Nair BG, Sack BR, Colwell RR, Sack DA.  2003.  Pathogenic Potential of Environmental Vibrio Cholerae Strains Carrying Genetic Variants of the Toxin-Coregulated Pilus Pathogenicity Island. Infection and ImmunityInfect. Immun.. 71(2):1020-1025.
Nirkhe V, Pugh W.  1993.  A partial evaluator for the Maruti hard real-time system. Real-Time Systems. 5(1):13-30.
Nagarajan N, Pop M.  2009.  Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing. Journal of Computational Biology. 16(7):897-908.
Miller BP, Callaghan MD, Cargille JM, Hollingsworth J, Irvin RB, Karavanic KL, Kunchithapadam K, Newhall T.  1995.  The Paradyn parallel performance measurement tool. Computer. 28(11):37-46.
Islam MS, Tasmin R, s l a m Khan SI, Bakht HBM, a y a t Mahmood ZH, i a u r Rahman MZ, m i n Bhuiyan NA, Nishibuchi M, a l a k r i s h Nair GB, r a d l e y Sack RB et al..  2004.  Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh. Canadian Journal of Microbiology. 50(10):827-834.
Islam MS, Tasmin R, s l a m Khan SI, Bakht HBM, a y a t Mahmood ZH, i a u r Rahman MZ, m i n Bhuiyan NA, Nishibuchi M, a l a k r i s h Nair GB, r a d l e y Sack RB et al..  2004.  Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh. Canadian Journal of Microbiology. 50(10):827-834.
Hwang H, Lauw HW, Getoor L, Ntoulas A.  2012.  Organizing User Search Histories. Knowledge and Data Engineering, IEEE Transactions on. 24(5):912-925.
Narayanan KA, O'Leary DP, Rosenfeld A.  1982.  An Optimization Approach to Edge Reinforcement. IEEE Transactions on Systems, Man, and Cybernetics. SMC-12:551-553.
Arya S, Mount D, Netanyahu NS, Silverman R, Wu AY.  1998.  An optimal algorithm for approximate nearest neighbor searching fixed dimensions. Journal of the ACM (JACM). 45(6):891-923.
Mozumder PK, Banu MA, Naser MN, Ali MS, Alam M, Sack RB, Colwell RR, Huq A.  2012.  Occurrence of protozoans & their limnological relationships in some ponds of Mathbaria, Bangladesh. University Journal of Zoology, Rajshahi University. 29(1):69-71.
Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al..  2014.  Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX + El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.
Carver JC, Hochstein LM, Kendall RP, Nakamura T, Zelkowitz MV, Basili VR, Post DE.  2006.  Observations about software development for high end computing. CTWatch Quarterly. 2(4A):33-38.
Bakay M, Wang Z, Melcon G, Schiltz L, Xuan J, Zhao P, Sartorelli V, Seo J, Pegoraro E, Angelini C et al..  2006.  Nuclear Envelope Dystrophies Show a Transcriptional Fingerprint Suggesting Disruption of Rb–MyoD Pathways in Muscle Regeneration. BrainBrain. 129(4):996-1013.
Naiman AE, Babuška IM, Elman H.  1997.  A note on conjugate gradient convergence. Numerische Mathematik. 76(2):209-230.

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