Publications

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Varadarajan R, Hristidis V, Raschid L, Vidal ME, Ibá\ nez L, Rodríguez-Drumond H.  2009.  Flexible and efficient querying and ranking on hyperlinked data sources. Proceedings of the 12th International Conference on Extending Database Technology: Advances in Database Technology. :553-564.
Islamaj R, Getoor L, Wilbur W.  2006.  A feature generation algorithm for sequences with application to splice-site prediction. Knowledge Discovery in Databases: PKDD 2006. :553-560.
Fleischer L K, Saniee I, Shepherd F B, Srinivasan A.  2007.  Fast and scalable approximation methods for finding minimum cost flows with .... 10/053,079(7280526)
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Ibrahim A, Katz B, Jimmy Lin.  2003.  Extracting structural paraphrases from aligned monolingual corpora. Proceedings of the second international workshop on Paraphrasing - Volume 16. :57-64.
Di Persio T, Isbister D, Shneiderman B.  1980.  An experiment using memorization/reconstruction as a measure of programmer ability. International Journal of Man-Machine Studies. 13(3):339-354.
Zelkowitz MV, Kowalchack B, Itkin D, Herman L.  1989.  Experiences building a syntax-directed editor. Software Engineering Journal. 4(6):294-294.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Zelkowitz MV, Elgot J, Itkin D, Kowalchack B, Maggio M.  1985.  The Engineering of an Environment on Small Machines. Proceedings of the IEEE 1st International Conference on Computer Workstations. :61-69.
Lam H, Bertini E, Isenberg P, Plaisant C, Carpendale S.  2011.  Empirical Studies in Information Visualization: Seven Scenarios. Visualization and Computer Graphics, IEEE Transactions on. PP(99):1-1.
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Nasr-Azadani F, Unnikrishnan A, Akanda A, Islam S, Alam M, Huq A, Jutla A, Colwell RR.  2015.  Downscaling river discharge to assess the effects of climate change on cholera outbreaks in the Bengal Delta. Climate Research. 64(3):257-274.
Purdy AE, Balch D, Lizárraga‐Partida M L, Islam M S, Martinez‐Urtaza J, Huq A, Colwell RR, Bartlett DH.  2010.  Diversity and distribution of cholix toxin, a novel ADP‐ribosylating factor from Vibrio cholerae. Environmental Microbiology Reports. 2(1):198-207.
Korpal M, Ell BJ, Buffa FM, Ibrahim T, Blanco MA, Celià-Terrassa T, Mercatali L, Khan Z, Goodarzi H, Hua Y et al..  2011.  Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization. Nature Medicine. 17(9):1101-1108.
Keeley MB, Wood MA, Isiegas C, Stein J, Hellman K, Hannenhalli S, Abel T.  2006.  Differential Transcriptional Response to Nonassociative and Associative Components of Classical Fear Conditioning in the Amygdala and Hippocampus. Learning & MemoryLearn. Mem.. 13(2):135-142.
Ito E, Aloimonos Y.  1987.  Determining three dimensional transformation parameters from images: Theory. 1987 IEEE International Conference on Robotics and Automation. Proceedings. 4:57-61.
Benford S, Bederson BB, \AAkesson KP, Bayon V, Druin A, Hansson P, Hourcade JP, Ingram R, Neale H, O'Malley C et al..  2000.  Designing storytelling technologies to encouraging collaboration between young children. Proceedings of the SIGCHI conference on Human factors in computing systems. :556-563.
Elaine Shi, Waters B.  2008.  Delegating Capabilities in Predicate Encryption Systems. Automata, Languages and Programming. 5126:560-578.
Catarci T, Costabile MF, Cruz IF, Ioannidis Y, Shneiderman B.  1997.  Data models, visual representations, metaphors: how to solve the puzzle? (panel) Proceedings of the third IFIP WG2.6 working conference on Visual database systems 3 (VDB-3). :177-182.
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Ponnusamy D, Kozlova EV, Sha J, Erova TE, Azar SR, Fitts EC, Kirtley ML, Tiner BL, Andersson JA, Grim CJ et al..  2016.  Cross-talk among flesh-eating Aeromonas hydrophila strains in mixed infection leading to necrotizing fasciitis. Proceedings of the National Academy of Sciences. 11312161268(3321029):722-727.
Iwerks GS, Samet H, Smith K.  2003.  Continuous k-nearest neighbor queries for continuously moving points with updates. Proceedings of the 29th international conference on Very large data bases-Volume 29. :512-523.
Vishkin U.  2010.  Computer Memory Architecture for Hybrid Serial and Parallel Computing Systems. 12/721,252
El-Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C et al..  2005.  Comparative Genomics of Trypanosomatid Parasitic Protozoa. Science. 309(5733):404-409.
Alam M, Islam A, Bhuiyan NA, Rahim N, Hossain A, Khan GY, Ahmed D, Watanabe H, Izumiya H, Faruque ASG et al..  2011.  Clonal transmission, dual peak, and off-season cholera in Bangladesh. Infection Ecology & Epidemiology. 1(1)
Alam M, Islam A, Bhuiyan NA, Rahim N, Hossain A, Khan GY, Ahmed D, Watanabe H, Izumiya H, Faruque ASG et al..  2011.  Clonal transmission, dual peak, and off-season cholera in Bangladesh. Infection Ecology & Epidemiology. 1(1)
Ivanova EP, Matte GR, Matte MH, Coenye T, Huq A, Colwell RR.  2002.  Characterization of Pseudoalteromonas citrea and P. nigrifaciens Isolated from Different Ecological Habitats Based on REP-PCR Genomic Fingerprints. Systematic and Applied Microbiology. 25(2):275-283.

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