Publications

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Journal Articles
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL et al..  2002.  Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature. 419(6906):512-519.
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL et al..  2002.  Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature. 419(6906):512-519.
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL et al..  2002.  Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature. 419(6906):512-519.
Berriman M, Ghedin E, Hertz-Fowler C, Blandin G, Renauld H, Bartholomeu DC, Lennard NJ, Caler E, Hamlin NE, Haas B et al..  2005.  The genome of the African trypanosome Trypanosoma brucei. Science. 309(5733):416-416.
Brettin T S[L A N L, Bruce D C[L A N L, Challacombe J F[L A N L, Detter J C[L A N L, Han C S[L A N L, Munik C[L A N LA, Chertkov O[L A N L, Meincke L[L A N L, Saunders E[L A N L, Choi S Y[SEOUL NATL UNIV et al..  2009.  Genome assortment, not serogroup, defines Vibrio cholerae pandemic strains. Nature.
Brettin T S[L A N L, Bruce D C[L A N L, Challacombe J F[L A N L, Detter J C[L A N L, Han C S[L A N L, Munik C[L A N LA, Chertkov O[L A N L, Meincke L[L A N L, Saunders E[L A N L, Choi S Y[SEOUL NATL UNIV et al..  2009.  Genome assortment, not serogroup, defines Vibrio cholerae pandemic strains. Nature.
Brettin T S[L A N L, Bruce D C[L A N L, Challacombe J F[L A N L, Detter J C[L A N L, Han C S[L A N L, Munik C[L A N LA, Chertkov O[L A N L, Meincke L[L A N L, Saunders E[L A N L, Choi S Y[SEOUL NATL UNIV et al..  2009.  Genome assortment, not serogroup, defines Vibrio cholerae pandemic strains. Nature.
Brettin T S[L A N L, Bruce D C[L A N L, Challacombe J F[L A N L, Detter J C[L A N L, Han C S[L A N L, Munik C[L A N LA, Chertkov O[L A N L, Meincke L[L A N L, Saunders E[L A N L, Choi S Y[SEOUL NATL UNIV et al..  2009.  Genome assortment, not serogroup, defines Vibrio cholerae pandemic strains. Nature.
Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly M M, Brown IH, Couacy-Hymann E, De Mia G M, Dung D H et al..  2007.  Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerging Infectious DiseasesEmerg Infect Dis. 13(5):713-718.
Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly M M, Brown IH, Couacy-Hymann E, De Mia G M, Dung D H et al..  2007.  Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerging Infectious DiseasesEmerg Infect Dis. 13(5):713-718.
Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly M M, Brown IH, Couacy-Hymann E, De Mia G M, Dung D H et al..  2007.  Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerging Infectious DiseasesEmerg Infect Dis. 13(5):713-718.
Clayton C, Adams M, Almeida R, Baltz T, Barrett M, Bastien P, Belli S, Beverley S, Biteau N, Blackwell J et al..  1998.  Genetic nomenclature for Trypanosoma and Leishmania.. Mol Biochem Parasitol. 97(1-2):221-4.
Clayton C, Adams M, Almeida R, Baltz T, Barrett M, Bastien P, Belli S, Beverley S, Biteau N, Blackwell J et al..  1998.  Genetic nomenclature for Trypanosoma and Leishmania.. Molecular and biochemical parasitology. 97(1-2):221-221.
Clayton C, Adams M, Almeida R, Baltz T, Barrett M, Bastien P, Belli S, Beverley S, Biteau N, Blackwell J et al..  1998.  Genetic nomenclature for Trypanosoma and Leishmania.. Mol Biochem Parasitol. 97(1-2):221-4.
Clayton C, Adams M, Almeida R, Baltz T, Barrett M, Bastien P, Belli S, Beverley S, Biteau N, Blackwell J et al..  1998.  Genetic nomenclature for Trypanosoma and Leishmania.. Mol Biochem Parasitol. 97(1-2):221-4.
Neel MC, Cummings MP.  2003.  Genetic consequences of ecological reserve design guidelines: An empirical investigation. Conserv Genet. 4(4):427-439.
Rashed S.M, Mannan S.B, Johura F.-T., Islam M.T, Sadique A., Watanabe H., Sack R.B, Huq A., Colwell RR, Cravioto A. et al..  2012.  Genetic characteristics of drug-resistant Vibrio cholerae O1 causing endemic cholera in Dhaka, 2006-2011. Journal of Medical Microbiology. :1736-1745.
Rashed S.M, Mannan S.B, Johura F.-T., Islam M.T, Sadique A., Watanabe H., Sack R.B, Huq A., Colwell RR, Cravioto A. et al..  2012.  Genetic characteristics of drug-resistant Vibrio cholerae O1 causing endemic cholera in Dhaka, 2006-2011. Journal of Medical Microbiology. :1736-1745.
Cummings MP, Otto SP, Wakeley J.  1999.  Genes and other samples of DNA sequence data for phylogenetic inference. The Biological Bulletin. 196(3):345-350.
Cleaveland R, Sims ST.  2002.  Generic tools for verifying concurrent systems. Science of Computer Programming. 42(1):39-47.
Li B, Chellappa R.  2002.  A generic approach to simultaneous tracking and verification in video. Image Processing, IEEE Transactions on. 11(5):530-544.
Celikkan U, Cleaveland R.  1995.  Generating diagnostic information for behavioral preorders. Distributed computing. 9(2):61-75.
Celikkan U, Cleaveland R.  1995.  Generating diagnostic information for behavioral preorders. Distributed computing. 9(2):61-75.
Zhou S, Chellappa R, Jacobs DW.  2004.  Generalized photometric stereo and its application to face recognition. International Journal of Computer Vision.
Fredette AN, Cleaveland R.  1993.  A generalized approach to real-time schedulability analysis. IEEE Real-Time Systems Newsletter. 9(1-2):98-103.

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