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Crary K, Hicks MW, Weirich S.  2000.  Safe and Flexible Dynamic Linking of Native Code. Technical Reports (CIS).
Craver SA, Wu M, Liu B, Stubblefield A, Swartzlander B, Wallach DS, Dean D, Felten EW.  2001.  Reading between the lines: Lessons from the SDMI challenge. Proceedings of the 10th USENIX Security Symposium. :13-17.
Craver SA, M. Wu, Liu B.  2001.  What can we reasonably expect from watermarks? Applications of Signal Processing to Audio and Acoustics, 2001 IEEE Workshop on the. :223-226.
Cukier M, Sharma A.  2007.  Password Changes: Empirical Results. Computers and Software Engineering.
Cukier M, Panjwani S.  2009.  Prioritizing Vulnerability Remediation by Determining Attacker-Targeted Vulnerabilities. Security Privacy, IEEE. 7(1):42-48.
Cukier M, Arlat J, Powell D.  1998.  Frequentist and Bayesian Coverage Estimations for Stratified Fault-Injection. DEPENDABLE COMPUTING AND FAULT TOLERANT SYSTEMS. 11:43-62.
Cukier M, Chandra R, Henke D, Pistole J, Sanders WH.  1999.  Fault injection based on a partial view of the global state of a distributed system. :168-177.
Cukier M, Berthier R, Panjwani S, Tan S.  2006.  A Statistical Analysis of Attack Data to Separate Attacks. :383-392.
Cukier M, Ren J, Rubel P, Bakken DE, Karr DA.  1999.  Building dependable distributed objects with the AQuA architecture. :17-18.
Cukier M, Powell D, Ariat J.  1999.  Coverage estimation methods for stratified fault-injection. Computers, IEEE Transactions on. 48(7):707-723.
Cukier M, Ren J, Sabnis C, Henke D, Pistole J, Sanders WH, Bakken DE, Berman ME, Karr DA, Schantz RE.  1998.  AQuA: an adaptive architecture that provides dependable distributed objects. Seventeenth IEEE Symposium on Reliable Distributed Systems. :245-253.
Cukier M, Panjwani S.  2007.  A Comparison between Internal and External Malicious Traffic. :109-114.
Cukier M, Lyons J, Pandey P, Ramasamy HV, Sanders WH, Pal P, Webber F, Schantz R, Loyall J, Watro R.  2001.  Intrusion tolerance approaches in ITUA. 64
Cummings MP, Welschmeyer NA.  1998.  Pigment composition of putatively achlorophyllous angiosperms. Plant Syst Evol. 210(1-2):105-111.
Cummings MP.  2004.  A book like its cover. Heredity. 93(2):234-235.
Cummings MP, Huskamp JC.  2005.  Grid computing. EDUCAUSE Review. 40:116-117.
Cummings MP, King LM, Kellogg EA.  1994.  Slipped-strand mispairing in a plastid gene: ıt rpoC2 in grasses (Poaceae). Mol Biol Evol. 11(1):1-8.
Cummings MP, Otto SP, Wakeley J.  1999.  Genes and other samples of DNA sequence data for phylogenetic inference. The Biological Bulletin. 196(3):345-350.
Cummings MP, Myers DS.  2004.  Simple statistical models predict C-to-U edited sites in plant mitochondrial RNA. BMC Bioinformatics. 5:132-132.
Cummings MP, Temple GG.  2010.  Broader incorporation of bioinformatics in education: opportunities and challenges. Brief Bioinform. 11(537-543)
Cummings MP, Nugent JM, Olmstead RG, Palmer JD.  2003.  Phylogenetic analysis reveals five independent transfers of the chloroplast gene ıt rbcL to the mitochondrial genome in angiosperms. Curr Genet. 43(2):131-138.
Cummings MP, Segal MR.  2004.  Few amino acid positions in ıt rpoB are associated with most of the rifampin resistance in ıt Mycobacterium tuberculosis. BMC Bioinformatics. 5:137-137.
Cummings MP, Otto SP, Wakeley J.  1995.  Sampling properties of DNA sequence data in phylogenetic analysis. Mol Biol Evol. 12(5):814-822.
Cummings MP, Myers DS, Mangelson M.  2004.  Applying permutation tests to tree-based statistical models: extending the R package rpart. 2004-24
Cummings MP, Clegg MT.  1998.  Nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley (ıt Hordeum vulgare ssp. ıt spontaneum): an evaluation of the background selection hypothesis. Proc Natl Acad Sci USA. 95(10):5637-5642.