Publications

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2013
Bitansky N, Dachman-Soled D, Garg S, Jain A, Kalai YTauman, López-Alt A, Wichs D.  2013.  Why “Fiat-Shamir for Proofs” Lacks a Proof. Theory of Cryptography. :182-201.
2014
Hasan NA, Young BA, Minard-Smith AT, Saeed K, Li H, Heizer EM, McMillan NJ, Isom R, Abdullah AShakur, Bornman DM et al..  2014.  Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.
Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al..  2014.  Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX + El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Budowle B, Connell ND, Bielecka-Oder A, Colwell RR, Corbett CR, Fletcher J, Forsman M, Kadavy DR, Markotic A, Morse SA et al..  2014.  Validation of high throughput sequencing and microbial forensics applications. Investigative Genetics. 5(1):9.
Budowle B, Connell ND, Bielecka-Oder A, Colwell RR, Corbett CR, Fletcher J, Forsman M, Kadavy DR, Markotic A, Morse SA et al..  2014.  Validation of high throughput sequencing and microbial forensics applications. Investigative Genetics. 5(1):9.
D. Grimes J, Ford TE, Colwell RR, Baker-Austin C, Martinez-Urtaza J, Subramaniam A, Capone DG.  2014.  Viewing Marine Bacteria, Their Activity and Response to Environmental Drivers from Orbit. Microbial Ecology. (38):489-500.
2015
Bartholomew JC, Pearson AD, Stenseth NC, LeDuc JW, Hirschberg DL, Colwell RR.  2015.  Building Infectious Disease Research Programs to Promote Security and Enhance Collaborations with Countries of the Former Soviet Union. Frontiers in Public Health. 35361632
Cardone A, Bornstein A, Pant HC, Brady M, Sriram R, Hassan SA.  2015.  Detection and characterization of nonspecific, sparsely populated binding modes in the early stages of complexation.. J Comput Chem.
Klinzing DC, Choi SYoung, Hasan NA, Matias RR, Tayag E, Geronimo J, Skowronski E, Rashed SM, Kawashima K, C. Rosenzweig N et al..  2015.  Hybrid Vibrio cholerae El Tor Lacking SXT Identified as the Cause of a Cholera Outbreak in the Philippines. mBio. (2)
Jutla A, Aldaach H, Billian H, Akanda A, Huq A, Colwell RR.  2015.  Satellite Based Assessment of Hydroclimatic Conditions Related to Cholera in Zimbabwe. PLOS ONE. (9Suppl 1):e0137828.
Bajcsy P, Cardone A, Chalfoun J, Halter M, Juba D, Kociolek M, Majurski M, Peskin A, Simon C, Simon M et al..  2015.  Survey statistics of automated segmentations applied to optical imaging of mammalian cells. BMC bioinformatics. 16:1.
Bajcsy P, Cardone A, Chalfoun J, Halter M, Juba D, Kociolek M, Majurski M, Peskin A, Simon C, Simon M et al..  2015.  Survey statistics of automated segmentations applied to optical imaging of mammalian cells. BMC bioinformatics. 16:1.
2016
Florczyk SJ, Simon M, Juba D, P Pine S, Sarkar S, Chen D, Baker PJ, Bodhak S, Cardone A, Brady M et al..  2016.  3D Cellular Morphotyping of Scaffold Niches. 2016 32nd Southern Biomedical Engineering Conference (SBEC).
Florczyk SJ, Simon M, Juba D, P Pine S, Sarkar S, Chen D, Baker PJ, Bodhak S, Cardone A, Brady M et al..  2016.  3D Cellular Morphotyping of Scaffold Niches. 2016 32nd Southern Biomedical Engineering Conference (SBEC).
Sanhueza D, Chevillon C, Colwell RR, Babonneau J, Marion E, Marsollier L, gan çoisé.  2016.  Chitin promotes Mycobacterium ulcerans growth. FEMS Microbiology Ecology. 928565871(6):fiw067.
Sanhueza D, Chevillon C, Colwell RR, Babonneau J, Marion E, Marsollier L, gan çoisé.  2016.  Chitin promotes Mycobacterium ulcerans growth. FEMS Microbiology Ecology. 928565871(6):fiw067.
Rashid M-ur, Almeida M, Azman AS, Lindsay BR, Sack DA, Colwell RR, Huq A, J. Morris G, Alam M, O. Stine C.  2016.  Comparison of inferred relatedness based on multilocus variable-number tandem-repeat analysis and whole genome sequencing of Vibrio cholerae O1. FEMS Microbiology Letters. 36389(12):fnw116.
Rashid M-ur, Almeida M, Azman AS, Lindsay BR, Sack DA, Colwell RR, Huq A, J. Morris G, Alam M, O. Stine C.  2016.  Comparison of inferred relatedness based on multilocus variable-number tandem-repeat analysis and whole genome sequencing of Vibrio cholerae O1. FEMS Microbiology Letters. 36389(12):fnw116.
Cardone A, Brady M, Sriram R., Pant H.C, Hassan S.A.  2016.  Computational study of the inhibitory mechanism of the kinase CDK5 hyperactivity by peptide p5 and derivation of a pharmacophore. Journal of Computer-Aided Molecular Design. 30(6):513-521.
Ponnusamy D, Kozlova EV, Sha J, Erova TE, Azar SR, Fitts EC, Kirtley ML, Tiner BL, Andersson JA, Grim CJ et al..  2016.  Cross-talk among flesh-eating Aeromonas hydrophila strains in mixed infection leading to necrotizing fasciitis. Proceedings of the National Academy of Sciences. 11312161268(3321029):722-727.
Ottesen A, Ramachandran P, Reed E, White JR, Hasan N, Subramanian P, Ryan G, Jarvis K, Grim C, Daquiqan N et al..  2016.  Enrichment dynamics of Listeria monocytogenes and the associated microbiome from naturally contaminated ice cream linked to a listeriosis outbreak. BMC Microbiology.
Motesharrei S, Rivas J, Kalnay E, Asrar GR, Busalacchi AJ, Cahalan RF, Cane MA, Colwell RR, Feng K, Franklin RS et al..  2016.  Modeling Sustainability: Population, Inequality, Consumption, and Bidirectional Coupling of the Earth and Human Systems. National Science Review. :nww081.
Motesharrei S, Rivas J, Kalnay E, Asrar GR, Busalacchi AJ, Cahalan RF, Cane MA, Colwell RR, Feng K, Franklin RS et al..  2016.  Modeling Sustainability: Population, Inequality, Consumption, and Bidirectional Coupling of the Earth and Human Systems. National Science Review. :nww081.

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