Publications

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Journal Articles
Sane N, Ford J, Harris AI, Bhattacharyya SS.  2012.  Prototyping scalable digital signal processing systems for radio astronomy using dataflow models. Radio Science. 47(3):n/a-n/a.
Basu MK, Selengut JD, Haft DH.  2011.  ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.. BMC Bioinformatics. 12:434.
Hjaltason GR, Samet H.  2003.  Properties of embedding methods for similarity searching in metric spaces. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 25(5):530-549.
Hannenhalli S, Levy S.  2001.  Promoter prediction in the human genome. Bioinformatics. 17(Suppl 1):S90-S96-S90-S96.
Ouhammouch M, Langham GE, Hausner W, Simpson AJ, El-Sayed NM, Geiduschek PE.  2005.  Promoter architecture and response to a positive regulator of archaeal transcription. Molecular Microbiology. 56(3):625-637.
Hung E, Getoor L, V.S. Subrahmanian.  2007.  Probabilistic interval XML. ACM Transactions on Computational Logic (TOCL). 8(4)
Han B, Davis LS.  2009.  Probabilistic fusion-based parameter estimation for visual tracking. Computer Vision and Image Understanding. 113(4):435-445.
Hua S, Qu G, Bhattacharyya SS.  2007.  Probabilistic design of multimedia embedded systems. ACM Transactions on Embedded Computing Systems (TECS). 6(3):15–es-15–es.
Lindenbaum M, Samet H, Hjaltason GR.  2006.  A probabilistic analysis of trie-based sorting of large collections of line segments in spatial databases. SIAM Journal on Computing. 35(1):22-58.
Huang Y, Evans D, Katz J.  2011.  Private Set Intersection: Are Garbled Circuits Better than Custom Protocols? 19th Network and Distributed Security Symposium.
Cleaveland R, Hennessy M.  1990.  Priorities in process algebras. Information and Computation. 87(1-2):58-77.
Haley BJ, Grim CJ, Hasan NA, Taviani E, Chun J, Brettin TS, Bruce DC, Challacombe JF, Detter CJ, Han CS et al..  2010.  The pre‐seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir. Environmental Microbiology Reports. 2(1):208-216.
Haley BJ, Grim CJ, Hasan NA, Taviani E, Chun J, Brettin TS, Bruce DC, Challacombe JF, Detter CJ, Han CS et al..  2010.  The pre‐seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir. Environmental Microbiology Reports. 2(1):208-216.
Haley BJ, Grim CJ, Hasan NA, Taviani E, Chun J, Brettin TS, Bruce DC, Challacombe JF, Detter CJ, Han CS et al..  2010.  The pre‐seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir. Environmental Microbiology Reports. 2(1):208-216.
Haley BJ, Grim CJ, Hasan NA, Taviani E, Chun J, Brettin TS, Bruce DC, Challacombe JF, Detter CJ, Han CS et al..  2010.  The pre‐seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir. Environmental Microbiology Reports. 2(1):208-216.
Hwang E, Prabhakaran B, V.S. Subrahmanian.  2002.  Presentation planning for distributed VoD systems. Knowledge and Data Engineering, IEEE Transactions on. 14(5):1059-1077.
Colwell RR, Unnikrishnan A, Jutla A, Huq A, Akanda A.  2015.  Predictive Time Series Analysis Linking Bengal Cholera with Terrestrial Water Storage Measured from Gravity Recovery and Climate Experiment Sensors. The American Journal of Tropical Medicine and Hygiene. 93(6):1179-1186.
Hannenhalli S, Levy S.  2002.  Predicting Transcription Factor Synergism. Nucleic Acids ResearchNucl. Acids Res.. 30(19):4278-4284.
Constantin de Magny G, Long W, Brown CW, Hood RR, Huq A, Murtugudde R, Colwell RR.  2009.  Predicting the distribution of Vibrio spp. in the Chesapeake Bay: a Vibrio cholerae case study. EcoHealth. 6(3):378-389.
Constantin de Magny G, Long W, Brown CW, Hood RR, Huq A, Murtugudde R, Colwell RR.  2009.  Predicting the distribution of Vibrio spp. in the Chesapeake Bay: a Vibrio cholerae case study. EcoHealth. 6(3):378-389.
Louis VR, Russek-Cohen E, Choopun N, Rivera ING, Gangle B, Jiang SC, Rubin A, Patz JA, Huq A, Colwell RR.  2003.  Predictability of Vibrio Cholerae in Chesapeake Bay. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 69(5):2773-2785.
Bader DA, Helman DR, JaJa JF.  1996.  Practical parallel algorithms for personalized communication and integer sorting. Journal of Experimental Algorithmics (JEA). 1
Huang Y, Feamster N, Teixeira R.  2008.  Practical issues with using network tomography for fault diagnosis. SIGCOMM Comput. Commun. Rev.. 38(5):53-58.
Neamtiu I, Hicks MW, Stoyle G, Oriol M.  2006.  Practical dynamic software updating for C. SIGPLAN Not.. 41(6):72-83.
Hajiaghayi MT, Immorlica N, Mirrokni VS.  2007.  Power optimization in fault-tolerant topology control algorithms for wireless multi-hop networks. IEEE/ACM Transactions on Networking (TON). 15(6):1345-1358.

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