Publications

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G
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease. Science. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran AN, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. Science. 309(5733)
Nagarajan N, Navajas-Pérez R, Pop M, Alam M, Ming R, Paterson A, Salzberg S.  2008.  Genome-Wide Analysis of Repetitive Elements in Papaya. Tropical Plant Biology. 1(3):191-201.
Nagarajan N, Navajas-Pérez R, Pop M, Alam M, Ming R, Paterson A, Salzberg S.  2008.  Genome-Wide Analysis of Repetitive Elements in Papaya. Tropical Plant Biology. 1(3):191-201.
Chen PE, Cook C, Stewart AC, Nagarajan N, Sommer DD, Pop M, Thomason B, Thomason MPK, Lentz S, Nolan N et al..  2010.  Genomic characterization of the Yersinia genus. Genome biology. 11(1)
Chen PE, Cook C, Stewart AC, Nagarajan N, Sommer DD, Pop M, Thomason B, Thomason MPK, Lentz S, Nolan N et al..  2010.  Genomic characterization of the Yersinia genus. Genome biology. 11(1)
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Yao Z, Gupta SK, Nau DS.  2000.  A Geometric Algorithm for Finding the Largest Milling Cutter. ISR; TR 2000-40
Yao Z, Gupta SK, Nau DS.  2000.  A geometric algorithm for finding the maximal cutter for 2-D milling operations. :26-28.
Yao Z, Gupta SK, Nau DS.  2000.  A Geometric Algorithm for Multi-Part Milling Cutter Selection. ISR; TR 2000-42
Yao Z, Gupta SK, Nau DS.  2001.  A geometric algorithm for selecting optimal set of cutters for multi-part milling. :130-139.
Frenkel A.I, Menard L.D, Northrup P., Rodriguez J.A, Zypman F., Dachman-Soled D, Gao S.-P., Xu H., Yang J.C, Nuzzo R.G.  2007.  Geometry and Charge State of Mixed‐Ligand Au13 Nanoclusters. X-RAY ABSORPTION FINE STRUCTURE - XAFS13: 13th International Conference. 882:749-751.
Frenkel A.I, Menard L.D, Northrup P., Rodriguez J.A, Zypman F., Dachman-Soled D, Gao S.-P., Xu H., Yang J.C, Nuzzo R.G.  2007.  Geometry and Charge State of Mixed‐Ligand Au13 Nanoclusters. X-RAY ABSORPTION FINE STRUCTURE - XAFS13: 13th International Conference. 882:749-751.
Le Moigne J, Netanyahu NS, Masek JG, Mount D, Goward S, Honzak M.  2000.  Geo-registration of Landsat data by robust matching of wavelet features. Geoscience and Remote Sensing Symposium, 2000. Proceedings. IGARSS 2000. IEEE 2000 International. 4:1610-1612vol.4-1610-1612vol.4.
James F, Lai J, Suhm B, Balentine B, Makhoul J, Nass C, Shneiderman B.  2002.  Getting real about speech: overdue or overhyped? CHI '02 extended abstracts on Human factors in computing systems. :708-709.
Yaman F, Nau DS, V.S. Subrahmanian.  2005.  Going far, logically. 19:615-615.
Dumitras T, Narasimhan P.  2007.  Got Predictability?: Experiences with Fault-tolerant Middleware MC'07 Proceedings of the 2007 ACM/IFIP/USENIX International Conference on Middleware Companion. :20:1-20:22.
Sharara H, Sopan A, Namata G, Getoor L, Singh L.  2011.  G-PARE: A visual analytic tool for comparative analysis of uncertain graphs. Visual Analytics Science and Technology (VAST), 2011 IEEE Conference on. :61-70.
Shahri H H, Namata G, Navlakha S, Deshpande A, Roussopoulos N.  2007.  A graph-based approach to vehicle tracking in traffic camera video streams. Proceedings of the 4th workshop on Data management for sensor networks: in conjunction with 33rd International Conference on Very Large Data Bases. :19-24.
Shahri H H, Namata G, Navlakha S, Deshpande A, Roussopoulos N.  2007.  A graph-based approach to vehicle tracking in traffic camera video streams. Proceedings of the 4th workshop on Data management for sensor networks: in conjunction with 33rd International Conference on Very Large Data Bases. :19-24.
Memon AM, Banerjee I, Nagarajan A.  2003.  GUI ripping: Reverse engineering of graphical user interfaces for testing. Proceedings of the 10th working conference on reverse engineering (WCRE’03). 1095(1350/03):17-00.
H
Schatz MC, Phillippy AM, Sommer DD, Delcher AL, Puiu D, Narzisi G, Salzberg SL, Pop M.  2011.  Hawkeye and AMOS: Visualizing and Assessing the Quality of Genome Assemblies. Briefings in Bioinformatics.
Hourcade J P, Bullock-Rest NE, Friedman B, Nelson M, Shneiderman B, Zaphiris P.  2011.  HCI for peace: from idealism to concrete steps. PART 2 ———– Proceedings of the 2011 annual conference extended abstracts on Human factors in computing systems. :613-616.
Kuter U, Nau DS, Pistore M, Traverso P.  2005.  A hierarchical task-network planner based on symbolic model checking. :300-309.

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