Publications

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2017
Florczyk SJ, Simon M, Juba D, P. Pine S, Sarkar S, Chen D, Baker PJ, Bodhak S, Cardone A, Brady MC et al..  2017.  A Bioinformatics 3D Cellular Morphotyping Strategy for Assessing Biomaterial Scaffold Niches. ACS Biomaterials Science & Engineering. 3(10):2302-2313.
Ceccarelli D, Garriss G, Choi SY, Hasan NA, Stepanauskas R, Pop M, Huq A, Colwell RR.  2017.  Characterization of Two Cryptic Plasmids Isolated in Haiti from Clinical Vibrio cholerae Non-O1/Non-O139. Frontiers in Microbiology.
McIntyre ABR, Ounit R, Afshinnekoo E, Prill RJ, Hénaff E, Alexander N, Minot SS, Danko D, Foox J, Ahsanuddin S et al..  2017.  Comprehensive benchmarking and ensemble approaches for metagenomic classifiers. Genome Biology. (1210)
Carpenter MR, Kalburge SS, Borowski JD, Peters MC, Colwell RR, E. Boyd F.  2017.  CRISPR-Cas and Contact-Dependent Secretion Systems Present on Excisable Pathogenicity Islands with Conserved Recombination Modules. Journal of Bacteriology. (10)
Tighe S, Afshinnekoo E, Rock TM, McGrath K, Alexander N, McIntyre A, Ahsanuddin S, Bezdan D, Green SJ, Joye S et al..  2017.  Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP). Journal of Biomolecular Techniques : JBT. 28(1):31-39.
Junqueira AC, Ratan A, Acerbi E, Drautz-Moses DI, Premkrishnan BNV, Costea PI, Linz B, Purbojati RW, Paulo DF, Gaultier NE et al..  2017.  The microbiomes of blowflies and houseflies as bacterial transmission reservoirs. Scientific Reports. (1)
Junqueira AC, Ratan A, Acerbi E, Drautz-Moses DI, Premkrishnan BNV, Costea PI, Linz B, Purbojati RW, Paulo DF, Gaultier NE et al..  2017.  The microbiomes of blowflies and houseflies as bacterial transmission reservoirs. Scientific Reports. (1)
Junqueira AC, Ratan A, Acerbi E, Drautz-Moses DI, Premkrishnan BNV, Costea PI, Linz B, Purbojati RW, Paulo DF, Gaultier NE et al..  2017.  The microbiomes of blowflies and houseflies as bacterial transmission reservoirs. Scientific Reports. (1)
2018
Stamps BW, Leddy MB, Plumlee MH, Hasan NA, Colwell RR, Spear JR.  2018.  Characterization of the Microbiome at the World’s Largest Potable Water Reuse Facility. Frontiers in Microbiology.
Leddy MB, Plumlee MH, Kantor RS, Nelson KL, Miller SE, Kennedy LC, Stamps BW, Spear JR, Hasan NA, Colwell RR.  2018.  High-Throughput DNA Sequencing To Profile Microbial Water Quality Of Potable Reuse.
2019
Al-Hebshi NNoor, Baraniya D, Chen T, Hill J, Puri S, Tellez M, Hassan NA, Colwell RR, Ismail A.  2019.  Metagenome sequencing-based strain-level and functional characterization of supragingival microbiome associated with dental caries in children. Journal of Oral Microbiology. (118):1557986.
Le ST, Guros NB, Bruce RC, Cardone A, Amin ND, Zhang S, Klauda J, Pant HC, Richter CA, Balijepalli A.  2019.  Quantum Capacitance-Limited MoS2 Biosensors Enable Remote Label-Free Enzyme Measurements. Nanoscale.
2020
Le ST, Morris MA, Cardone A, Guros NB, Klauda JB, Sperling BA, Richter CA, Pant HC, Balijepalli A.  2020.  Rapid, quantitative therapeutic screening for Alzheimer's enzymes enabled by optimal signal transduction with transistors. The Analyst. 145(8):2925-2936.
Submitted
Papamanthou C, Tamassia R, Triandopoulos N.  Submitted.  System and Method for Optimal Verification of Operations on Dynamic Sets.

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