Publications

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Hannenhalli S, Levy S.  2003.  Transcriptional regulation of protein complexes and biological pathways. Mammalian Genome. 14(9):611-619.
Hannenhalli S.  2006.  Invited Talk: Deciphering Gene Regulatory Networks by in silico approaches. 6th International Workshop on Data Mining in Bioinformatics (BIOKDD06). :31-31.
Hannenhalli S, Feldman W, Lewis HF, Skiena SS, Pevzner PA.  1996.  Positional sequencing by hybridization. Computer applications in the biosciences : CABIOS. 12(1):19-24.
Hannenhalli S, Levy S.  2002.  Predicting Transcription Factor Synergism. Nucleic Acids ResearchNucl. Acids Res.. 30(19):4278-4284.
Hannenhalli S, Hubbell E, Lipshutz R, Pevzner P.  2002.  Combinatorial Algorithms for Design of DNA Arrays. Chip TechnologyChip Technology. 77:1-19.
Hannenhalli S, Kaestner KH.  2009.  The evolution of Fox genes and their role in development and disease. Nature reviews. GeneticsNat Rev Genet. 10(4):233-240.
Hannenhalli S, Pevzner P.  1995.  Towards a computational theory of genome rearrangements. Computer Science TodayComputer Science Today. 1000:184-202.
Hannenhalli S, Middleton RP, Levy S, Perroud B, Holzwarth JA, McDonald K, Hannah SS.  2006.  Identification and cross-species comparison of canine osteoarthritic gene regulatory cis-elements. Osteoarthritis and Cartilage. 14(8):830-838.
Hannenhalli S, Pevzner PA.  1995.  Transforming men into mice (polynomial algorithm for genomic distance problem). Foundations of Computer Science, Annual IEEE Symposium on. :581-581.
Hannenhalli S.  1996.  Polynomial-time algorithm for computing translocation distance between genomes. Discrete Applied Mathematics. 71(1–3):137-151.
Hannenhalli S, Hayes WS, Hatzigeorgiou AG, Fickett JW.  1999.  Bacterial Start Site Prediction. Nucleic Acids ResearchNucl. Acids Res.. 27(17):3577-3582.
Hannenhalli S.  1995.  Transforming men into mice (a computational theory of genome rearrangements).
Hannenhalli S, Perumalla K, Chandrasekharan N, Sridhar R.  1993.  A distributed algorithm for ear decomposition. , Fifth International Conference on Computing and Information, 1993. Proceedings ICCI '93. :180-184.
Hannenhalli S, Pevzner P.  1996.  To cut… or not to cut (applications of comparative physical maps in molecular evolution). Proceedings of the seventh annual ACM-SIAM symposium on Discrete algorithms. :304-313.
Hannenhalli S, Chappey C, Koonin EV, Pevzner PA.  1995.  Genome Sequence Comparison and Scenarios for Gene Rearrangements: A Test Case. Genomics. 30(2):299-311.
Hannenhalli S.  1995.  Polynomial-time algorithm for computing translocation distance between genomes. Combinatorial Pattern MatchingCombinatorial Pattern Matching. 937:162-176.
Hannenhalli S, Russell RB.  2001.  Analysis and prediction of protein functional sub-types from protein sequence alignments. EP20000203764(EP1096411)
Hannenhalli S, Pevzner PA.  1999.  Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals. J. ACM. 46(1):1-27.
Han B, Ji L, Lee S, Bhattacharjee B, Miller RR.  2009.  All Bits Are Not Equal - A Study of IEEE 802.11 Communication Bit Errors. INFOCOM 2009, IEEE. :1602-1610.
Han B, Davis LS.  2009.  Probabilistic fusion-based parameter estimation for visual tracking. Computer Vision and Image Understanding. 113(4):435-445.
Han B, Davis LS.  2005.  Robust observations for object tracking. Image Processing, 2005. ICIP 2005. IEEE International Conference on. 2:II-442-5-II-442-5.
Han B, Hui P, Srinivasan A.  2010.  Mobile data offloading in metropolitan area networks. SIGMOBILE Mob. Comput. Commun. Rev.. 14(4):28-30.
Han Z, Lin C-K, Goldsman N, Mayergoyz ID, Yu S, Stettler M.  1999.  Gate leakage current simulation by Boltzmann transport equation and its dependence on the gate oxide thickness. Simulation of Semiconductor Processes and Devices, 1999. SISPAD '99. 1999 International Conference on. :247-250.
Han B, Joo SW, Davis LS.  2010.  Multi-Camera Tracking with Adaptive Resource Allocation. International Journal of Computer Vision. :1-14.
Han B, Joo S-W, Davis LS.  2007.  Probabilistic Fusion Tracking Using Mixture Kernel-Based Bayesian Filtering. Computer Vision, 2007. ICCV 2007. IEEE 11th International Conference on. :1-8.

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