Publications

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Vishnoi A, Kryazhimskiy S, Bazykin GA, Hannenhalli S, Plotkin JB.  2010.  Young Proteins Experience More Variable Selection Pressures Than Old Proteins. Genome ResearchGenome Res.. 20(11):1574-1581.
W
Papamanthou C, Paparrizos K, Samaras N, Stergiou K.  2008.  Worst case examples of an exterior point algorithm for the assignment problem. Discrete Optimization. 5(3):605-614.
Papamanthou C, Paparrizos K, Samaras N, Stergiou K.  2008.  Worst case examples of an exterior point algorithm for the assignment problem. Discrete Optimization. 5(3):605-614.
Plaisant C, Marchimini G, Bruns T, Komlodi A, Campbell L, Rose A, Ding GM, Beale Jr J, Nolet V, Shneiderman B et al..  2003.  The World's Information in Digital Libraries. The craft of information visualization: readings and reflectionsThe craft of information visualization: readings and reflections. :149-149.
Carr R, Raboin E, Parker A, Nau DS.  2009.  Within epsilon of optimal play in the cultaptation social learning game. :1327-1328.
Zotenko E, Mestre J, O'Leary DP, Przytycka TM.  2008.  Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality. PLoS Comput BiolPLoS Comput Biol. 4(8):e1000140-e1000140.
Kembhavi A, Tom Yeh, Davis LS.  2010.  Why Did the Person Cross the Road (There)? Scene Understanding Using Probabilistic Logic Models and Common Sense Reasoning Computer Vision – ECCV 2010. 6312:693-706.
Ricaldi JN, Fouts DE, Selengut JD, Harkins DM, Patra KP, Moreno A, Lehmann JS, Purushe J, Sanka R, Torres M et al..  2012.  Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity.. PLoS Negl Trop Dis. 6(10):e1853.
Ricaldi JN, Fouts DE, Selengut JD, Harkins DM, Patra KP, Moreno A, Lehmann JS, Purushe J, Sanka R, Torres M et al..  2012.  Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity.. PLoS Negl Trop Dis. 6(10):e1853.
Grinstein G, Kobsa A, Plaisant C, Shneiderman B, Stasko JT.  2003.  Which comes first, usability or utility? Proceedings of the 14th IEEE Visualization 2003 (VIS'03). :112–-112–.
Hascoët-Zizi M, Ahlberg C, Korfhage R, Plaisant C, Chalmers M, Rao R.  1996.  Where is information visualization technology going? Proceedings of the 9th annual ACM symposium on User interface software and technology. :75-77.
Nau DS, Luštrek M, Parker A, Bratko I, Gams M.  2010.  When is it better not to look ahead? Artificial Intelligence. 174(16–17):1323-1338.
Plaisant C, Carr DA, Hasegawa H.  1992.  When an Intermediate View Matters a 2D-browser Experiment. Institute for Systems Research Technical Reports.
Vuillemot R, Clement T, Plaisant C, Kumar A.  2009.  What's being said near "Martha"? Exploring name entities in literary text collections Visual Analytics Science and Technology, 2009. VAST 2009. IEEE Symposium on. :107-114.
Shull F, Basili VR, Boehm B, Brown AW, Costa P, Lindvall M, Port D, Rus I, Tesoriero R, Zelkowitz MV.  2002.  What we have learned about fighting defects. Software Metrics, 2002. Proceedings. Eighth IEEE Symposium on. :249-258.
Anderson ML, Perlis D.  2009.  What puts the “meta” in metacognition? Behavioral and Brain Sciences. 32(02):138-139.
Agrawal A, Raskar R, Chellappa R.  2006.  What Is the Range of Surface Reconstructions from a Gradient Field? Computer Vision – ECCV 2006Computer Vision – ECCV 2006. 3951:578-591.
Perlis D, Miller M, Perlis D.  1994.  What Experts Deny, Novices Must Understand. In 3rd International Workshop on Human and Machine Cognition.
Perlis D, Miller M, Perlis D.  1994.  What Experts Deny, Novices Must Understand. In 3rd International Workshop on Human and Machine Cognition.
Perlis D.  2000.  What does it take to refer? a reply to Bojadziev Journal of Consciousness Studies. 7(5):67-69.
Perlis D.  2000.  What does it take to refer. Journal of Consciousness Studies. 7(5):67-9.
Grossman D, Manson J, Pugh W.  2006.  What do high-level memory models mean for transactions? Proceedings of the 2006 workshop on Memory system performance and correctness - MSPC '06. :62-62.
Piatetsky-Shapiro G, Djeraba C, Getoor L, Grossman R, Feldman R, Zaki M.  2006.  What are the grand challenges for data mining? - KDD-2006 panel report ACM SIGKDD Explorations Newsletter. 8(2):70-77.
Pop M.  2012.  We are what we eat: how the diet of infants affects their gut microbiome. Genome Biology. 13(4)
Ji H, Fermüller C.  2006.  Wavelet-Based Super-Resolution Reconstruction: Theory and Algorithm. Computer Vision – ECCV 2006Computer Vision – ECCV 2006. 3954:295-307.

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