Publications

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2005
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease. Science. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran AN, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. Science. 309(5733)
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma Cruzi, Etiologic Agent of Chagas Disease. ScienceScience. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease. Science. 309(5733):409-415.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran A-N, Ghedin E, Worthey EA, Delcher AL, Blandin G et al..  2005.  The Genome Sequence of Trypanosoma Cruzi, Etiologic Agent of Chagas Disease. ScienceScience. 309(5733):409-415.
Dunlavy DM, O'Leary DP, Klimov D, Thirumalai D.  2005.  HOPE: A Homotopy Optimization Method for Protein Structure Prediction. Journal of Computational Biology. 12(10):1275-1288.
Katz J, Ostrovsky R, Rabin M.  2005.  Identity-based zero-knowledge. Security in Communication Networks. :180-192.
Ogale AS, Fermüller C, Aloimonos Y.  2005.  Motion segmentation using occlusions. IEEE Transactions on Pattern Analysis and Machine Intelligence. 27(6):988-992.
Ouhammouch M, Langham GE, Hausner W, Simpson AJ, El-Sayed NM, Geiduschek PE.  2005.  Promoter architecture and response to a positive regulator of archaeal transcription. Molecular Microbiology. 56(3):625-637.
O'Leary DP, Bullock SS.  2005.  QR Factorizations Using a Restricted Set of Rotations. Electronic Transactions on Numerical Analysis. 21:20-27.
Ogale AS, Aloimonos Y.  2005.  Robust Contrast Invariant Stereo Correspondence. Proceedings of the 2005 IEEE International Conference on Robotics and Automation, 2005. ICRA 2005. :819-824.
Boyen X, Dodis Y, Katz J, Ostrovsky R, Smith A.  2005.  Secure remote authentication using biometric data. Advances in Cryptology–EUROCRYPT 2005. :147-163.
Ogale AS, Aloimonos Y.  2005.  Shape and the stereo correspondence problem. International Journal of Computer Vision. 65(3):147-162.
Kurc T, Catalyurek U, Zhang X, Saltz J, Martino R, Wheeler M, Peszyńska M, Sussman A, Hansen C, Sen M et al..  2005.  A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studies. Concurrency and Computation: Practice and Experience. 17(11):1441-1467.
Harper M, Dorr BJ, Hale J, Roark B, Shafran I, Lease M, Liu Y, Snover M, Yung L, Krasnyanskaya A et al..  2005.  Structural metadata and parsing speech.
Oriol M, Hicks MW.  2005.  Tagged Sets: A Secure and Transparent Coordination Medium. Coordination Models and LanguagesCoordination Models and Languages. 3454:193-205.
Louis VR, Gillespie IA, O'Brien SJ, Russek-Cohen E, Pearson AD, Colwell RR.  2005.  Temperature-Driven Campylobacter Seasonality in England and Wales. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 71(1):85-92.
Bullock SS, Brennen GK, O’Leary DP.  2005.  Time reversal and n-qubit canonical decompositions. Journal of Mathematical Physics. 46(6):062104-062104-19-062104-062104-19.
Odom J, Hollingsworth J, DeRose L, Ekanadham K, Sbaraglia S.  2005.  Using Dynamic Tracing Sampling to Measure Long Running Programs. Proceedings of the 2005 ACM/IEEE conference on Supercomputing. :59–-59–.
2004
Baker P, Ogale AS, Fermüller C.  2004.  The Argus eye: a new imaging system designed to facilitate robotic tasks of motion. IEEE Robotics & Automation Magazine. 11(4):31-38.
Baker P, Ogale AS, Fermüller C, Aloimonos Y.  2004.  The Argus eye, a new tool for robotics. IEEE Robotics and Automation Magazine. 11(4):31-38.
Byrne W, Doermann D, Franz M, Gustman S, Hajic J, Oard D, Picheny M, Psutka J, Ramabhadran B.  2004.  Automatic recognition of spontaneous speech for access to multilingual oral history archives. IEEE Transactions on Speech and Audio Processing, Special Issue on Spontaneous Speech Processing. 12(4):420-435.
Oard D, Soergel D, Doermann D, Huang X, Murray CG, Wang J, Ramabhadran B, Franz M, Gustman S, Mayfield J et al..  2004.  Building an information retrieval test collection for spontaneous conversational speech. Proceedings of the 27th annual international ACM SIGIR conference on Research and development in information retrieval. :41-48.
Martin, M.P, others.  2004.  DNS of hypersonic turbulent boundary layers. AIAA Paper. 2337:2004-2004.
Dorr BJ, Monz C, Oard D, President S, Zajic D, Schwartz R.  2004.  Extrinsic Evaluation of Automatic Metrics for Summarization.

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