Publications

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Journal Articles
Zelkowitz MV, Yeh RT, Hamlet RG, Gannon JD, Basili VR.  1984.  Software Engineering Practices in the US and Japan. Computer. 17(6):57-66.
Steitz JA, Wolin SL, Rinke J, Pettersson I, Mount SM, Lerner EA, Hinterberger M, Gottlieb E.  1983.  Small Ribonucleoproteins from Eukaryotes: Structures and Roles in RNA Biogenesis. Cold Spring Harbor Symposia on Quantitative BiologyCold Spring Harb Symp Quant Biol. 47:893-900.
Morris MS, Reggia JA, Ahuja SB, Hart J, Watson V.  1984.  SLIPS. Journal of Medical Systems. 8(3):197-204.
Selengut JD, Rusch DB, Haft DH.  2010.  Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein function.. BMC Bioinformatics. 11:52.
Kurc T, Catalyurek U, Zhang X, Saltz J, Martino R, Wheeler M, Peszyńska M, Sussman A, Hansen C, Sen M et al..  2005.  A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studies. Concurrency and Computation: Practice and Experience. 17(11):1441-1467.
Choopun N, Louis V, Huq A, Colwell RR.  2002.  Simple Procedure for Rapid Identification of Vibrio Cholerae from the Aquatic Environment. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 68(2):995-998.
Patel VM, Easley GR, Healy DM.  2009.  Shearlet-Based Deconvolution. IEEE Transactions on Image Processing. 18(12):2673-2685.
Plaisant C, Clamage A, Hutchinson H B, Bederson BB, Druin A.  2006.  Shared family calendars: Promoting symmetry and accessibility. ACM Trans. Comput.-Hum. Interact.. 13(3):313-346.
Fermin DR, Barac A, Lee S, Polster SP, Hannenhalli S, Bergemann TL, Grindle S, Dyke DB, Pagani F, Miller LW et al..  2008.  Sex and Age Dimorphism of Myocardial Gene Expression in Nonischemic Human Heart Failure. Circulation: Cardiovascular Genetics. 1(2):117-125.
Fermin DR, Barac A, Lee S, Polster SP, Hannenhalli S, Bergemann TL, Grindle S, Dyke DB, Pagani F, Miller LW et al..  2008.  Sex and Age Dimorphism of Myocardial Gene Expression in Nonischemic Human Heart Failure. Circulation: Cardiovascular Genetics. 1(2):117-125.
Lazar J, Jones A, Hackley M, Shneiderman B.  2006.  Severity and impact of computer user frustration: A comparison of student and workplace users. Interacting with Computers. 18(2):187-207.
Moore JT, Hicks MW.  1997.  A Service Layer Routing Protocol for PLAN. PLAN documentation, September.
Alam M, Chowdhury WB, Bhuiyan NA, Islam A, Hasan NA, Nair BG, Watanabe H, Siddique AK, Huq A, Sack BR et al..  2009.  Serogroup, Virulence, and Genetic Traits of Vibrio Parahaemolyticus in the Estuarine Ecosystem of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 75(19):6268-6274.
Alam M, Chowdhury WB, Bhuiyan NA, Islam A, Hasan NA, Nair BG, Watanabe H, Siddique AK, Huq A, Sack BR et al..  2009.  Serogroup, Virulence, and Genetic Traits of Vibrio Parahaemolyticus in the Estuarine Ecosystem of Bangladesh. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 75(19):6268-6274.
Caburlotto G, Haley BJ, Lleò MM, Huq A, Colwell RR.  2010.  Serodiversity and ecological distribution of Vibrio parahaemolyticus in the Venetian Lagoon, Northeast Italy. Environmental Microbiology Reports. 2(1):151-157.
Caburlotto G, Haley BJ, Lleò MM, Huq A, Colwell RR.  2010.  Serodiversity and ecological distribution of Vibrio parahaemolyticus in the Venetian Lagoon, Northeast Italy. Environmental Microbiology Reports. 2(1):151-157.
Meister JA, Foster JS, Hicks MW.  2010.  Serializing C intermediate representations for efficient and portable parsing. Software: Practice and Experience. 40(3):225-238.
Salzberg SL, Hotopp J CD, Delcher AL, Pop M, Smith DR, Eisen MB, Nelson WC.  2005.  Serendipitous discovery of Wolbachia genomes in multiple Drosophila species. Genome Biology. 6(3):R23-R23.
Han B, Comaniciu D, Davis LS.  2004.  Sequential kernel density approximation through mode propagation: applications to background modeling. Proc. ACCV. 2004
Han B, Comaniciu D, Zhu Y, Davis LS.  2008.  Sequential Kernel Density Approximation and Its Application to Real-Time Visual Tracking. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 30(7):1186-1197.
Cerqueira GC, Bartholomeu DC, DaRocha WD, Hou L, Freitas-Silva DM, Machado C R, El-Sayed NM, Teixeira SMR.  2008.  Sequence diversity and evolution of multigene families in Trypanosoma cruzi. Molecular and Biochemical Parasitology. 157(1):65-72.
El-Sayed NM, Ghedin E, Song J, MacLeod A, Bringaud F, Larkin C, Wanless D, Peterson J, Hou L, Taylor S et al..  2003.  The sequence and analysis of Trypanosoma brucei chromosome II. Nucleic acids research. 31(16):4856-4856.
Mitamura T, Miller K, Dorr BJ, Farwell D, Habash N, Helmreich S, Hovy E, Levin L, Rambow O, Reeder F et al..  2004.  Semantic Annotation for Interlingual Representation of Multilingual Texts. Workshop Programme. :19-19.
Mitamura T, Miller K, Dorr BJ, Farwell D, Habash N, Helmreich S, Hovy E, Levin L, Rambow O, Reeder F et al..  2004.  Semantic Annotation for Interlingual Representation of Multilingual Texts. Workshop Programme. :19-19.
Mitamura T, Miller K, Dorr BJ, Farwell D, Habash N, Helmreich S, Hovy E, Levin L, Rambow O, Reeder F et al..  2004.  Semantic Annotation for Interlingual Representation of Multilingual Texts. Workshop Programme. :19-19.

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