Publications

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Journal Articles
Fushman D, Najmabadi-Haske T, Cahill S, Zheng J, LeVine H, Cowburn D.  1998.  The Solution Structure and Dynamics of the Pleckstrin Homology Domain of G Protein-coupled Receptor Kinase 2 (β-Adrenergic Receptor Kinase 1) A BINDING PARTNER OF Gβγ SUBUNITS. Journal of Biological ChemistryJ. Biol. Chem.. 273(5):2835-2843.
McDonnell JM, Fushman D, Cahill SM, Zhou W, Wolven A, Wilson CB, Nelle TD, Resh MD, Wills J, Cowburn D.  1998.  Solution structure and dynamics of the bioactive retroviral M domain from rous sarcoma virus. Journal of Molecular Biology. 279(4):921-928.
Varadan R, Assfalg M, Haririnia A, Raasi S, Pickart C, Fushman D.  2004.  Solution Conformation of Lys63-linked Di-ubiquitin Chain Provides Clues to Functional Diversity of Polyubiquitin Signaling. Journal of Biological ChemistryJ. Biol. Chem.. 279(8):7055-7063.
Mundada Y, Ramachandran A, Feamster N.  2011.  SilverLine: Data and Network Isolation for Cloud Services. 2nd USENIX Workshop on Hot Topics in Cloud Computing.
Boneh D, Freeman D, Katz J, Waters B.  2009.  Signing a linear subspace: Signature schemes for network coding. Public Key Cryptography–PKC 2009. :68-87.
Brodsky T, Fermüller C, Aloimonos Y.  1998.  Shape from video: Beyond the epipolar constraint. Proceedings of the DARPA Image Understanding Workshop.
Fermin DR, Barac A, Lee S, Polster SP, Hannenhalli S, Bergemann TL, Grindle S, Dyke DB, Pagani F, Miller LW et al..  2008.  Sex and Age Dimorphism of Myocardial Gene Expression in Nonischemic Human Heart Failure. Circulation: Cardiovascular Genetics. 1(2):117-125.
Meister JA, Foster JS, Hicks MW.  2010.  Serializing C intermediate representations for efficient and portable parsing. Software: Practice and Experience. 40(3):225-238.
Cerqueira GC, Bartholomeu DC, DaRocha WD, Hou L, Freitas-Silva DM, Machado C R, El-Sayed NM, Teixeira SMR.  2008.  Sequence diversity and evolution of multigene families in Trypanosoma cruzi. Molecular and Biochemical Parasitology. 157(1):65-72.
Mangeruca L, Baleani M, Ferrari A, Sangiovanni-Vincentelli A.  2007.  Semantics-Preserving Design of Embedded Control Software from Synchronous Models. Software Engineering, IEEE Transactions on. 33(8):497-509.
Baker K, Bethard S, Bloodgood M, Brown R, Callison-Burch C, Coppersmith G, Dorr BJ, Filardo W, Giles K, Irvine A et al..  2009.  Semantically informed machine translation (SIMT). SCALE summer workshop final report, Human Language Technology Center Of Excellence.
Mitamura T, Miller K, Dorr BJ, Farwell D, Habash N, Helmreich S, Hovy E, Levin L, Rambow O, Reeder F et al..  2004.  Semantic Annotation for Interlingual Representation of Multilingual Texts. Workshop Programme. :19-19.
Dorr BJ, Green R, Levin L, Rambow O, Farwell D, Habash N, Helmreich S, Hovy E, Miller KJ, Mitamura T et al..  2004.  Semantic annotation and lexico-syntactic paraphrase. Proceedings of the 4th International Conference on Language Resources and Evaluation (LREC) Workshop on Building Lexical Resources from Semantically Annotated Corpora. :47-52.
Anderson ML, Fults S, Josyula DP, Oates T, Perlis D, Wilson S, Wright D.  2008.  A self-help guide for autonomous systems. AI Magazine. 29(2):67-67.
Brodskỳ T, Fermüller C.  2004.  Self-Calibration from Image Derivatives. International Journal of Computer Vision. 48(2):91-114.
Aloimonos Y, Fermüller C, Rosenfeld A.  1995.  Seeing and understanding: representing the visual world. ACM Comput. Surv.. 27(3):307-309.
Mishra A, Petroni Jr NL, Arbaugh WA, Fraser T.  2004.  Security issues in IEEE 802.11 wireless local area networks: a survey. Wireless Communications and Mobile Computing. 4(8):821-833.
Arbaugh WA, Davin JR, Farber DJ, Smith JM.  1998.  Security for virtual private intranets. Computer. 31(9):48-55.
Ramachandran A, Mundada Y, Tariq MB, Feamster N.  2008.  Securing enterprise networks using traffic tainting. Special Interest Group on Data Communication.
Stine CO, Alam M, Tang L, Nair BG, Siddique KA, Faruque SM, Huq A, Colwell RR, Sack BR, Morris GJ.  2008.  Seasonal Cholera from Multiple Small Outbreaks, Rural Bangladesh. Emerging Infectious DiseasesEmerg Infect Dis. 14(5):831-833.
Belhumeur P, Chen D, Feiner S, Jacobs DW, Kress W, Ling H, Lopez I, Ramamoorthi R, Sheorey S, White S.  2008.  Searching the world’s herbaria: A system for visual identification of plant species. Computer Vision–ECCV 2008. :116-129.
Plaisant C, Lam S, Shneiderman B, Smith MS, Roseman D, Marchand G, Gillam M, Feied C, Handler J, Rappaport H.  2008.  Searching Electronic Health Records for Temporal Patterns in Patient Histories: A Case Study with Microsoft Amalga. AMIA Annual Symposium ProceedingsAMIA Annu Symp Proc. 2008:601-605.
Funkhouser T, Min P, Kazhdan M, Chen J, Halderman A, Dobkin D, Jacobs DW.  2003.  A search engine for 3D models. ACM Trans. Graph.. 22(1):83-105.
Hicks MW, Foster JS.  2010.  SCORE: agile research group management. Commun. ACM. 53(10):30-31.
Kembhavi A, Siddiquie B, Miezianko R, McCloskey S, Davis LS, Schwartz WR, Harwood D, Gupta A, Farrell R, Luo Y et al..  2009.  Scene it or not? incremental multiple kernel learning for object detection Proceedings of the International Conference on Computer Vision.

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