Publications

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Journal Articles
Alivisatos A.P, Blaser M.J, Brodie E.L, Chun M., Dangl J.L, Donohue T.J, Dorrestein P.C, Gilbert J.A, Green J.L, Jansson J.K et al..  2015.  A unified initiative to harness Earth's microbiomes. Science. (62607551614341176):507-508.
Alivisatos A.P, Blaser M.J, Brodie E.L, Chun M., Dangl J.L, Donohue T.J, Dorrestein P.C, Gilbert J.A, Green J.L, Jansson J.K et al..  2015.  A unified initiative to harness Earth's microbiomes. Science. (62607551614341176):507-508.
Li-Baboud Y-S, Cardone A, Chalfoun J, Bajcsy P, Elliott J.  2013.  Understanding the impact of image quality on segmentation accuracy. SPIE Newsroom.
Li-Baboud Y-S, Cardone A, Chalfoun J, Bajcsy P, Elliott J.  2013.  Understanding the impact of image quality on segmentation accuracy. SPIE Newsroom.
Basili VR, Carver JC, Cruzes D, Hochstein LM, Hollingsworth J, Shull F, Zelkowitz MV.  2008.  Understanding the High-Performance-Computing Community: A Software Engineer's Perspective. Software, IEEE. 25(4):29-36.
Basili VR, Carver JC, Cruzes D, Hochstein LM, Hollingsworth J, Shull F, Zelkowitz MV.  2008.  Understanding the High-Performance-Computing Community: A Software Engineer's Perspective. Software, IEEE. 25(4):29-36.
Bessiere K, Ceaparu I, Lazar J, Robinson J, Shneiderman B.  2003.  Understanding Computer User Frustration: Measuring and Modeling the Disruption from Poor Designs. Technical Reports from UMIACS.
Chaiyanan S, Chaiyanan S, Grim C, Maugel T, Huq A, Colwell RR.  2007.  Ultrastructure of coccoid viable but non‐culturable Vibrio cholerae. Environmental Microbiology. 9(2):393-402.
Chaiyanan S, Chaiyanan S, Grim C, Maugel T, Huq A, Colwell RR.  2007.  Ultrastructure of coccoid viable but non‐culturable Vibrio cholerae. Environmental Microbiology. 9(2):393-402.
Chaiyanan S, Chaiyanan S, Grim C, Maugel T, Huq A, Colwell RR.  2007.  Ultrastructure of coccoid viable but non‐culturable Vibrio cholerae. Environmental Microbiology. 9(2):393-402.
Verma R, Peters NR, D'Onofrio M, Tochtrop GP, Sakamoto KM, Varadan R, Zhang M, Coffino P, Fushman D, Deshaies RJ et al..  2004.  Ubistatins Inhibit Proteasome-Dependent Degradation by Binding the Ubiquitin Chain. Science. 306(5693):117-120.
Cleaveland R, Panangaden P.  1988.  Type theory and concurrency. International Journal of Parallel Programming. 17(2):153-206.
Wong PC, Chen C, Görg C, Shneiderman B, Stasko J, Thomas J.  2011.  Tutorial-Graph Analytics — Lessons Learned and Challenges Ahead. IEEE Computer Graphics and Applications. 31(5):18-18.
Westenberger S, Cerqueira G, El-Sayed NM, Zingales B, Campbell D, Sturm N.  2006.  Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region. BMC Genomics. 7(1):60-60.
Westenberger S, Cerqueira G, El-Sayed NM, Zingales B, Campbell D, Sturm N.  2006.  Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region. BMC Genomics. 7(1):60-60.
Sengupta B, Cleaveland R.  2002.  Triggered message sequence charts. ACM SIGSOFT Software Engineering Notes. 27:167-167.
Tilghman S, Astin HS, Brinkley W, Chilton MD, Cummings MP, Ehrenberg RG, Fox MF, Glenn K, Green PJ, Hans S et al..  1998.  Trends in the early careers of life scientists - Preface and executive summary. Mol Biol Cell. 9(11):3007-3015.
Tilghman S, Astin HS, Brinkley W, Chilton MD, Cummings MP, Ehrenberg RG, Fox MF, Glenn K, Green PJ, Hans S et al..  1998.  Trends in the early careers of life scientists - Preface and executive summary. Mol Biol Cell. 9(11):3007-3015.
Nguyen VA, Boyd-Graber J, Chang J, Resnik P.  Submitted.  Tree-based Label Dependency Topic Models. cs.umd.edu.
Čomić L, De Floriani L.  2009.  Tree-Based Encoding for Cancellations on Morse Complexes. Combinatorial Image Analysis. :330-343.
Cummings MP.  1994.  Transmission patterns of eukaryotic transposable elements - arguments for and against horizontal transfer. Trends Ecol Evol. 9(4):141-145.
Snellman EA, Colwell RR.  2008.  Transesterification activity of a novel lipase from Acinetobacter venetianus RAG-1. Antonie van Leeuwenhoek. 94(4):621-625.
Boonyaratanakornkit BB, Simpson AJ, Whitehead TA, Fraser CM, El-Sayed NM, Clark DS.  2005.  Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non‐lethal cold shock. Environmental Microbiology. 7(6):789-797.
Hannenhalli S, Putt ME, Gilmore JM, Wang J, Parmacek MS, Epstein JA, Morrisey EE, Margulies KB, Cappola TP.  2006.  Transcriptional Genomics Associates FOX Transcription Factors With Human Heart Failure. Circulation. 114(12):1269-1276.
Shao J, Zhou SK, Chellappa R.  2005.  Tracking Algorithm Using Background-Foreground Motion Models and Multiple Cues. ICASSP apos. :233-236.

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