Publications

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Han B, Yang C, Duraiswami R, Davis LS.  2005.  Bayesian filtering and integral image for visual tracking. Proceedings of the Worshop on Image Analysis for Multimedia Interactive Services (WIAMIS'05).
Ayres DL, Darling A, Zwickl DJ, Beerli P, Holder MT, Lewis PO, Huelsenbeck JP, Ronquist F, Swofford DL, Cummings MP et al..  2012.  BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Systematic BiologySyst Biol. 61(1):170-173.
Ayres DL, Darling A, Zwickl DJ, Beerli P, Holder MT, Lewis PO, Huelsenbeck JP, Ronquist F, Swofford DL, Cummings MP et al..  2012.  BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Systematic BiologySyst Biol. 61(1):170-173.
Aloimonos Y, Duriç Z, Fermüller C, Huang L, Rivlin E, Sharma R.  1992.  Behavioral Visual Motion Analysis,". Proceedings, DARPA Image Understanding Workshop. :521-541.
Hollingsworth J, Guven E, Akinlar C.  1998.  Benchmarking a network of PCs running parallel applications. Performance, Computing and Communications, 1998. IPCCC '98., IEEE International. :1-7.
Fomin EDDFV, Hajiaghayi MT, Thilikos DM.  2004.  Bidimensional Parameters and Local Treewidth. Latin 2004: Theoretical Informatics: 6th Latin American Symposium, Buenos Aires, Argentina, April 5-8, 2004: Proceedings. :109-109.
Hu Y, Boyd-Graber J, III HDaume, Z Ying I.  2013.  Binary to Bushy: Bayesian Hierarchical Clustering with the Beta Coalescent. :1079-1087.
Hollingsworth J, Miller EL, Akala K.  1999.  Binary version management for computational grids. Parallel processing letters. 9(2):215-225.
Sultana M, Nusrin S, Hasan NA, Sadique A, Ahmed KU, Islam A, Hossain A, Longini I, Nizam A, Huq A et al..  2018.  Biofilms Comprise a Component of the Annual Cycle of Vibrio cholerae in the Bay of Bengal Estuary. mBio. (2):e00483-18.
Sultana M, Nusrin S, Hasan NA, Sadique A, Ahmed KU, Islam A, Hossain A, Longini I, Nizam A, Huq A et al..  2018.  Biofilms Comprise a Component of the Annual Cycle of Vibrio cholerae in the Bay of Bengal Estuary. mBio. (2):e00483-18.
Sultana M, Nusrin S, Hasan NA, Sadique A, Ahmed KU, Islam A, Hossain A, Longini I, Nizam A, Huq A et al..  2018.  Biofilms Comprise a Component of the Annual Cycle of Vibrio cholerae in the Bay of Bengal Estuary. mBio. (2):e00483-18.
Huq A, Whitehouse CA, Grim CJ, Alam M, Colwell RR.  2008.  Biofilms in water, its role and impact in human disease transmission. Current Opinion in Biotechnology. 19(3):244-247.
Gevers D, Pop M, Schloss PD, Huttenhower C.  2012.  Bioinformatics for the Human Microbiome Project. PLoS Computational Biology. 8(11):e1002779.
Lee S, Wang TD, Hashmi N, Cummings MP.  2007.  Bio-STEER: A Semantic Web workflow tool for Grid computing in the life sciences. Future Generation Comp Syst. 23(3):497-509.
Elman H, Howle VE, Shadid J, Shuttleworth R, Tuminaro R.  2006.  Block preconditioners based on approximate commutators. SIAM Journal on Scientific Computing. 27(5):1651-1668.
Hwa R, Resnik P, Weinberg A, Cabezas C, Kolak O.  2005.  Bootstrapping parsers via syntactic projection across parallel texts. Nat. Lang. Eng.. 11(3):311-325.
Horvitz O, Katz J.  2010.  Bounds on the efficiency of black-box commitment schemes. Theoretical Computer Science. 411(10):1251-1260.
Horvitz O, Katz J.  2005.  Bounds on the efficiency of black-box commitment schemes. Automata, Languages and Programming. :62-62.
Hwa R, Resnik P, Weinberg A.  2002.  Breaking the resource bottleneck for multilingual applications.
Hwa R, Resnik P, Weinberg A.  2005.  Breaking the resource bottleneck for multilingual parsing.
Marchionini AS, Nation D, Karasik S, Cronnell T, Shneiderman B, Spotfire VDMU, Bederson BB, Data TS, Hochheiser H, Shneiderman B et al..  2003.  Bringing Treasures to the Surface: Previews and Overviews in a Prototype for the Library of Congress National Digital Library. The craft of information visualization: readings and reflections. :388-388.
Williams CC, Hollingsworth J.  2004.  Bug driven bug finders. Proceedings of the International Workshop on Mining Software Repositories. :70-74.
Seo J, Bakay M, Chen Y-W, Hilmer S, Shneiderman B, Hoffman EP.  2005.  Building a Coherent Data Pipeline in Microarray Data Analyses: Optimization of Signal/Noise Ratios Using an Interactive Visualization Tool and a Novel Noise Filtering Method (2003). Institute for Systems Research Technical Reports.
Seo J, Bakay M, Chen Y-W, Hilmer S, Shneiderman B, Hoffman EP.  2005.  Building a Coherent Data Pipeline in Microarray Data Analyses: Optimization of Signal/Noise Ratios Using an Interactive Visualization Tool and a Novel Noise Filtering Method (2003). Institute for Systems Research Technical Reports.
Oard D, Soergel D, Doermann D, Huang X, Murray CG, Wang J, Ramabhadran B, Franz M, Gustman S, Mayfield J et al..  2004.  Building an information retrieval test collection for spontaneous conversational speech. Proceedings of the 27th annual international ACM SIGIR conference on Research and development in information retrieval. :41-48.

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