Publications

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2015
Hasan NA, Rezayat T, Blatz PJ, Choi SYoung, Griffitt KJ, Rashed SM, Huq A, Conger NG, Colwell RR, D. Grimes J.  2015.  Nontoxigenic Vibrio cholerae Non-O1/O139 Isolate from a Case of Human Gastroenteritis in the U.S. Gulf Coast. Journal of Clinical Microbiology. (1):9-14.
Kokashvili T, Whitehouse CA, Tskhvediani A, Grim CJ, Elbakidze T, Mitaishvili N, Janelidze N, Jaiani E, Haley BJ, Lashkhi N et al..  2015.  Occurrence and Diversity of Clinically Important Vibrio Species in the Aquatic Environment of Georgia. Frontiers in Public Health.
Kokashvili T, Whitehouse CA, Tskhvediani A, Grim CJ, Elbakidze T, Mitaishvili N, Janelidze N, Jaiani E, Haley BJ, Lashkhi N et al..  2015.  Occurrence and Diversity of Clinically Important Vibrio Species in the Aquatic Environment of Georgia. Frontiers in Public Health.
Colwell RR, Unnikrishnan A, Jutla A, Huq A, Akanda A.  2015.  Predictive Time Series Analysis Linking Bengal Cholera with Terrestrial Water Storage Measured from Gravity Recovery and Climate Experiment Sensors. The American Journal of Tropical Medicine and Hygiene. 93(6):1179-1186.
Esteves K, Hervio-Heath D, Mosser T, Rodier C, Tournoud M-G, Jumas-Bilak E, Colwell RR, Monfort P.  2015.  Rapid Proliferation of Vibrio parahaemolyticus, Vibrio vulnificus, and Vibrio cholerae during Freshwater Flash Floods in French Mediterranean Coastal Lagoons. Applied and Environmental Microbiology. (21):7600-7609.
Jutla A, Aldaach H, Billian H, Akanda A, Huq A, Colwell RR.  2015.  Satellite Based Assessment of Hydroclimatic Conditions Related to Cholera in Zimbabwe. PLOS ONE. (9Suppl 1):e0137828.
Bajcsy P, Cardone A, Chalfoun J, Halter M, Juba D, Kociolek M, Majurski M, Peskin A, Simon C, Simon M et al..  2015.  Survey statistics of automated segmentations applied to optical imaging of mammalian cells. BMC bioinformatics. 16:1.
Zaitchik B.F, Guikema S.D, Haley B.J, Taviani E., Chen A., Brown M.E., Huq A., Colwell RR.  2015.  Use of Environmental Parameters to Model Pathogenic Vibrios in Chesapeake Bay. Journal of Environmental Informatics.
Zaitchik B.F, Guikema S.D, Haley B.J, Taviani E., Chen A., Brown M.E., Huq A., Colwell RR.  2015.  Use of Environmental Parameters to Model Pathogenic Vibrios in Chesapeake Bay. Journal of Environmental Informatics.
2014
Kirchberger P.C, Turnsek M., Hunt D.E, Haley B.J, Colwell RR, Polz M.F, Tarr C.L, Boucher Y..  2014.  Vibrio metoecus sp. nov., a close relative of Vibrio cholerae isolated from coastal brackish ponds and clinical specimens. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. (Pt 95616795215116120545121):3208-3214.
Kirchberger P.C, Turnsek M., Hunt D.E, Haley B.J, Colwell RR, Polz M.F, Tarr C.L, Boucher Y..  2014.  Vibrio metoecus sp. nov., a close relative of Vibrio cholerae isolated from coastal brackish ponds and clinical specimens. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. (Pt 95616795215116120545121):3208-3214.
Hasan NA, Young BA, Minard-Smith AT, Saeed K, Li H, Heizer EM, McMillan NJ, Isom R, Abdullah AShakur, Bornman DM et al..  2014.  Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.
Hasan NA, Young BA, Minard-Smith AT, Saeed K, Li H, Heizer EM, McMillan NJ, Isom R, Abdullah AShakur, Bornman DM et al..  2014.  Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.
Haley BJ, Kokashvili T, Tskshvediani A, Janelidze N, Mitaishvili N, Grim CJ, Constantin_de_Magny G, Chen AJ, Taviani E, Eliashvili T et al..  2014.  Molecular diversity and predictability of Vibrio parahaemolyticus along the Georgian coastal zone of the Black Sea. Frontiers in Microbiology. 5
Haley BJ, Kokashvili T, Tskshvediani A, Janelidze N, Mitaishvili N, Grim CJ, Constantin_de_Magny G, Chen AJ, Taviani E, Eliashvili T et al..  2014.  Molecular diversity and predictability of Vibrio parahaemolyticus along the Georgian coastal zone of the Black Sea. Frontiers in Microbiology. 5
Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al..  2014.  Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX + El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.
Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al..  2014.  Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX + El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.
2013
Nguyen VA, Hu Y, Boyd-Graber J.  2013.  Argviz: Interactive Visualization of Topic Dynamics in Multi-party Conversations. Human Language Technologies: The 2013 Annual Conference of the North American Chapter of the Association for Computational Linguistics.
Hu Y, Boyd-Graber J, III HDaume, Z Ying I.  2013.  Binary to Bushy: Bayesian Hierarchical Clustering with the Beta Coalescent. :1079-1087.
Hara K, Le V, Froehlich J.  2013.  Combining Crowdsourcing and Google Street View to Identify Street-level Accessibility Problems. CHI 2013 To Appear.
Rashid A, Haley BJ, Rajabov M, Ahmadova S, Gurbanov S, Colwell RR, Huq A.  2013.  Detection of Vibrio cholerae in environmental waters including drinking water reservoirs of Azerbaijan. Environmental Microbiology Reports. (1):30-38.
Rashid A, Haley BJ, Rajabov M, Ahmadova S, Gurbanov S, Colwell RR, Huq A.  2013.  Detection of Vibrio cholerae in environmental waters including drinking water reservoirs of Azerbaijan. Environmental Microbiology Reports. (1):30-38.
Hasan NA, Ceccarelli D, Grim CJ, Taviani E, Choi J, Sadique A, Alam M, Siddique AK, R. Sack B, Huq A et al..  2013.  Distribution of Virulence Genes in Clinical and Environmental Vibrio cholerae Strains in Bangladesh. Applied and Environmental Microbiology. (18):5782-5785.
Hasan NA, Ceccarelli D, Grim CJ, Taviani E, Choi J, Sadique A, Alam M, Siddique AK, R. Sack B, Huq A et al..  2013.  Distribution of Virulence Genes in Clinical and Environmental Vibrio cholerae Strains in Bangladesh. Applied and Environmental Microbiology. (18):5782-5785.
Chomvarin C., Johura F.-T., Mannan S.B, Jumroenjit W., Kanoktippornchai B., Tangkanakul W., Tantisuwichwong N., Huttayananont S., Watanabe H., Hasan N.A et al..  2013.  Drug response and genetic properties of Vibrio cholerae associated with endemic cholera in north-eastern Thailand, 2003-2011. Journal of Medical Microbiology. :599-609.

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