Publications

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2013
Haft DH, Selengut JD, Richter RA, Harkins D, Basu MK, Beck E.  2013.  TIGRFAMs and Genome Properties in 2013.. Nucleic Acids Res. 41(Database issue):D387-95.
Haft DH, Selengut JD, Richter RA, Harkins D, Basu MK, Beck E.  2013.  TIGRFAMs and Genome Properties in 2013.. Nucleic Acids Res. 41(Database issue):D387-95.
Li-Baboud Y-S, Cardone A, Chalfoun J, Bajcsy P, Elliott J.  2013.  Understanding the impact of image quality on segmentation accuracy. SPIE Newsroom.
Bitansky N, Dachman-Soled D, Garg S, Jain A, Kalai YTauman, López-Alt A, Wichs D.  2013.  Why “Fiat-Shamir for Proofs” Lacks a Proof. Theory of Cryptography. :182-201.
2012
Ayres DL, Darling A, Zwickl DJ, Beerli P, Holder MT, Lewis PO, Huelsenbeck JP, Ronquist F, Swofford DL, Cummings MP et al..  2012.  BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Systematic BiologySyst Biol. 61(1):170-173.
Bilge L, Dumitras T.  2012.  Before We Knew It: An Empirical Study of Zero-day Attacks in the Real World. CCS '12 Proceedings of the 2012 ACM conference on Computer and Communications Security. :833-844.
Satinoff B, Boyd-Graber J.  2012.  Besting the Quiz Master: Crowdsourcing Incremental Classification Games. Empirical Methods in Natural Language Processing.
Cardone A, Amelot J, Li-Baboud Y-S, Brady M, Bajcsy P.  2012.  Biases from model assumptions in texture sub-cellular image segmentation. SPIE Newsroom. 13
Cardone A, Amelot J, Li-Baboud Y-S, Brady M, Bajcsy P.  2012.  Biases from model assumptions in texture sub-cellular image segmentation. SPIE Newsroom. 13
Nikolova S, Boyd-Graber J, Fellbaum C.  2012.  Collecting Semantic Similarity Ratings to Connect Concepts in Assistive Communication Tools. Modeling, Learning, and Processing of Text Technological Data StructuresModeling, Learning, and Processing of Text Technological Data Structures. 370:81-93.
Froehlich J, Findlater L, Ostergren M, Ramanathan S, Peterson J, Wragg I, Larson E, Fu F, Bai M, Patel S.  2012.  The design and evaluation of prototype eco-feedback displays for fixture-level water usage data. :2367-2376.
Shen C-C, Wu S, Sane N, Wu H-H, Plishker W, Bhattacharyya SS.  2012.  Design and Synthesis for Multimedia Systems Using the Targeted Dataflow Interchange Format. IEEE Transactions on Multimedia. 14(3):630-640.
Fushman D.  2012.  Determining Protein Dynamics from 15N Relaxation Data by Using DYNAMICS. Protein NMR Techniques. 831:485-511.
Patel VM, Wu T, Biswas S, Phillips P, Chellappa R.  2012.  Dictionary-based Face Recognition Under Variable Lighting and Pose. IEEE Transactions on Information Forensics and Security. PP(99):1-1.
Nelson KS, Khan Z, Molnár I, Mihály J, Kaschube M, Beitel GJ.  2012.  Drosophila Src regulates anisotropic apical surface growth to control epithelial tube size. Nature Cell Biology. 14(5):518-525.
Johnson CN, Bowers JC, Griffitt KJ, Molina V, Clostio RW, Pei S, Laws E, Paranjpye RN, Strom MS, Chen A et al..  2012.  Ecology of Vibrio parahaemolyticus and Vibrio vulnificus in the Coastal and Estuarine Waters of Louisiana, Maryland, Mississippi, and Washington (United States). Applied and Environmental Microbiology. (20):7249-7257.
Canetti R, Dachman-Soled D, Vaikuntanathan V, Wee H.  2012.  Efficient Password Authenticated Key Exchange via Oblivious Transfer. Public Key Cryptography – PKC 2012. :449-466.
Hu Y, Boyd-Graber J.  2012.  Efficient Tree-Based Topic Modeling. Association for Computational Linguistics.
Balog K, de Vries AP, Serdyukov P, Wen J-R.  2012.  The first international workshop on entity-oriented search (EOS). SIGIR Forum. 45(2):43-50.
Methé BA, Nelson KE, Pop M, Creasy HH, Giglio MG, Huttenhower C, Gevers D, Petrosino JF, Abubucker S, Badger JH.  2012.  A framework for human microbiome research. Nature. 486:215-221.
Blanco MAndres, LeRoy G, Khan Z, Alečković M, Zee BM, Garcia BA, Kang Y.  2012.  Global secretome analysis identifies novel mediators of bone metastasis. Cell Research. 22(9):1339-1355.
Boyd-Graber J, Sayeed AB, Rusk B, Weinberg A.  2012.  Grammatical structures for word-level sentiment detection. North American Association of Computational Linguistics.
Arlt S, Banerjee I, Bertolini C, Memon AM, Schäf M.  2012.  Grey-box GUI Testing: Efficient Generation of Event Sequences. arXiv:1205.4928.
Arlt S, Banerjee I, Bertolini C, Memon AM, Schäf M.  2012.  Grey-box GUI Testing: Efficient Generation of Event Sequences. arXiv:1205.4928.
Zajic D, Doermann D, Bloodgood M, Rodrigues P, Ye P, Zotkina E.  2012.  A Hybrid System for Error Detection in Electronic Dictionaries. Technical Reports of the Center for the Advanced Study of Language.

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