Publications

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Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Bringaud F, Ghedin E, Blandin G, Bartholomeu DC, Caler E, Levin MJ, Baltz T, El-Sayed NM.  2006.  Evolution of non-LTR retrotransposons in the trypanosomatid genomes: Leishmania major has lost the active elements. Molecular and Biochemical Parasitology. 145(2):158-170.
Clegg MT, Cummings MP, Durbin ML.  1997.  The evolution of plant nuclear genes. Proc Natl Acad Sci USA. 94(15):7791-7798.
Clegg MT, Cummings MP, Durbin ML.  1997.  The evolution of plant nuclear genes. Proc Natl Acad Sci USA. 94(15):7791-7798.
M\üller-Olm M, Steffen B, Cleaveland R.  1999.  On the evolution of reactive components: A process-algebraic approach. Lecture notes in computer science. :161-175.
Roos P, Carr RJ, Nau DS.  2010.  Evolution of state-dependent risk preferences. ACM Transactions on Intelligent Systems and Technology (TIST). 1(1):6:1–6:21-6:1–6:21.
Chellappa R.  2011.  The evolution of stochastic grammars for representation and recognition of activities in videos. 2011 IEEE International Conference on Computer Vision Workshops (ICCV Workshops). :688-688.
Blair D, Campos A, Cummings MP, Laclette JP.  1996.  Evolutionary biology of parasitic platyhelminths: The role of molecular phylogenetics. Parasitol Today. 12(2):66-71.
Blair D, Campos A, Cummings MP, Laclette JP.  1996.  Evolutionary biology of parasitic platyhelminths: The role of molecular phylogenetics. Parasitol Today. 12(2):66-71.
Roe A, Weller S, Baixeras J, Brown JW, Cummings MP, Davis DR, Horak M, Kawahara AY, Mitter C, Parr CS et al..  2010.  Evolutionary framework for Lepidoptera model systems. Genetics and Molecular Biology of LepidopteraGenetics and Molecular Biology of Lepidoptera. :1-24.
Lindvall M, Rus I, Shull F, Zelkowitz MV, Donzelli P, Memon AM, Basili VR, Costa P, Tvedt R, Hochstein L.  2005.  An evolutionary testbed for software technology evaluation. Innovations in Systems and Software Engineering. 1(1):3-11.
Ni J, Turaga P, Patel VM, Chellappa R.  2011.  Example-Driven Manifold Priors for Image Deconvolution. Image Processing, IEEE Transactions on. 20(11):3086-3096.
Sengupta B, Cleaveland R.  2005.  Executable requirements specifications using triggered message sequence charts. Distributed Computing and Internet Technology. :482-493.
Ray A, Cleaveland R.  2008.  Executable Specifications for Real-Time Distributed Systems. Electronic Notes in Theoretical Computer Science. 203(4):3-17.
Spencer M, Ferreira R, Beynon M, Kurc T, Catalyurek U, Sussman A, Saltz J.  2002.  Executing Multiple Pipelined Data Analysis Operations in the Grid. SC Conference. :54-54.
Myers DS, Bazinet AL, Cummings MP.  2008.  Expanding the reach of Grid computing: combining Globus- and BOINC-based systems. Grids for Bioinformatics and Computational BiologyGrids for Bioinformatics and Computational Biology. :71-85.
Basili VR, Costa P, Lindvall M, Mendonca M, Seaman C, Tesoriero R, Zelkowitz MV.  2001.  An experience management system for a software engineering research organization. Software Engineering Workshop, 2001. Proceedings. 26th Annual NASA Goddard. :29-35.
Ramasamy HGV, Pandey P, Cukier M, Sanders WH.  2008.  Experiences with building an intrusion-tolerant group communication system. Software: Practice and Experience. 38(6):639-666.
Barrett C, Cook D, Hicks G, Faber V, Marathe A, Marathe M, Srinivasan A, Sussmann Y, Thornquist H.  2001.  Experimental Analysis of Algorithms for Bilateral-Contract Clearing Mechanisms Arising in Deregulated Power Industry. Algorithm EngineeringAlgorithm Engineering. 2141:172-184.
Lefever RM, Cukier M, Sanders WH.  2003.  An experimental evaluation of correlated network partitions in the Coda distributed file system. :273-282.
Gupta H, Agrawala AK, Pruthi T, Shekhar C, Chellappa R.  2002.  An experimental evaluation of linear and kernel-based methods for face recognition. Applications of Computer Vision, 2002. (WACV 2002). Proceedings. Sixth IEEE Workshop on. :13-18.
Joshi K, Cukier M, Sanders W.  2002.  Experimental Evaluation of the Unavailability Induced by a Group Membership Protocol. Dependable Computing EDCC-4. 2485:644-648.
Panjwani S, Tan S, Jarrin KM, Cukier M.  2005.  An experimental evaluation to determine if port scans are precursors to an attack. :602-611.
Hochstein L, Nakamura T, Basili VR, Asgari S, Zelkowitz MV, Hollingsworth J, Shull F, Carver J, Voelp M, Zazworka N et al..  2006.  Experiments to understand HPC time to development. CTWatch Quarterly.

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