Publications

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2007
Deshpande A, Ives Z, Raman V.  2007.  Adaptive query processing: why, how, when, what next? Proceedings of the 33rd international conference on Very large data bases. :1426-1427.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Fleischer L K, Saniee I, Shepherd F B, Srinivasan A.  2007.  Fast and scalable approximation methods for finding minimum cost flows with .... 10/053,079(7280526)
Hajiaghayi MT, Immorlica N, Mirrokni VS.  2007.  Power optimization in fault-tolerant topology control algorithms for wireless multi-hop networks. IEEE/ACM Transactions on Networking (TON). 15(6):1345-1358.
Ip CY, Gupta SK.  2007.  Retrieving matching CAD models by using partial 3D point clouds. Computer-Aided Design & Applications. 4(5):629-638.
Papamanthou C, Tamassia R.  2007.  Time and Space Efficient Algorithms for Two-Party Authenticated Data Structures. Information and Communications Security. :1-15.
2006
Keeley MB, Wood MA, Isiegas C, Stein J, Hellman K, Hannenhalli S, Abel T.  2006.  Differential Transcriptional Response to Nonassociative and Associative Components of Classical Fear Conditioning in the Amygdala and Hippocampus. Learning & MemoryLearn. Mem.. 13(2):135-142.
Islamaj R, Getoor L, Wilbur W.  2006.  A feature generation algorithm for sequences with application to splice-site prediction. Knowledge Discovery in Databases: PKDD 2006. :553-560.
Balch T, Dellaert F., Feldman A., Guillory A., Isbell C.L., Khan Z, Pratt S.C., Stein A.N., Wilde H..  2006.  How Multirobot Systems Research will Accelerate our Understanding of Social Animal Behavior. Proceedings of the IEEE. 94(7):1445-1463.
Wang L-S, Jensen S, Hannenhalli S.  2006.  An Interaction-Dependent Model for Transcription Factor Binding. Systems Biology and Regulatory GenomicsSystems Biology and Regulatory Genomics. 4023:225-234.
Ilghami O, Nau DS, Munoz-Avila H.  2006.  Learning to do HTN planning. :390-393.
Iwerks GS, Samet H, Smith KP.  2006.  Maintenance of K-nn and spatial join queries on continuously moving points. ACM Trans. Database Syst.. 31(2):485-536.
Andrews M, Hofmann M, Shepherd B, Srinivasan A, Winkler P, Zane F.  2006.  System and method for locating a closest server in response to a client .... 09/726,192(7020698)
2005
Nau DS, Au T-C, Ilghami O, Kuter U, Wu D, Yaman F, Munoz-Avila H, Murdock JW.  2005.  Applications of SHOP and SHOP2. Intelligent Systems, IEEE. 20(2):34-41.
El-Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C et al..  2005.  Comparative Genomics of Trypanosomatid Parasitic Protozoa. Science. 309(5733):404-409.
Ilghami O, Muñoz-Avila H, Nau DS, Aha DW.  2005.  Learning approximate preconditions for methods in hierarchical plans. :337-344.
Ilghami O, Nau DS, Muñoz-Avila H, Aha DW.  2005.  Learning preconditions for planning from plan traces and HTN structure. Computational Intelligence. 21(4):388-413.
Cleaveland R, Iyer PS, Narasimha M.  2005.  Probabilistic temporal logics via the modal mu-calculus. Theoretical Computer Science. 342(2-3):316-350.
2004
El-Sayed NM, Bartholomeu D, Ivens A, Johnston DA, LoVerde PT.  2004.  Advances in schistosome genomics. Trends in Parasitology. 20(4):154-157.
Ishimori N, Walsh K, Zheng X, Lu F, Hannenhalli S, Nusskern D, Mural R, Paigen B.  2004.  CHARACTERIZATION OF Ath17, A QUANTITATIVE TRAIT LOCUS FOR ATHEROSCLEROSIS SUSCEPTIBILITY BETWEEN C57BL/6J AND 129S1/SvImJ; SINGLE-NUCLEOTIDE POLYMORPHISMS HAVE IMPORTANT IMPLICATIONS ON IDENTIFYING ATHEROSCLEROSIS MODIFIER GENES. Cardiovascular Pathology. 13(3, Supplement):5-6.
Bǎdoiu M, Demaine ED, Hajiaghayi MT, Indyk P.  2004.  Low-dimensional embedding with extra information. Proceedings of the twentieth annual symposium on Computational geometry. :320-329.
Iwerks GS, Samet H, Smith KP.  2004.  Maintenance of Spatial Semijoin Queries on Moving Points. Proceedings 2004 VLDB ConferenceProceedings 2004 VLDB Conference. :828-839.
Aravamudan M, Kumaran K, Ramakrishnan K G, Srinivasan A.  2004.  Method of designing signaling networks for internet telephony. : 09/517,658(6687363)
Herrmann JW, Cooper J, Gupta SK, Hayes CC, Ishii K, Kazmer D, Sandborn PA, Wood WH.  2004.  New directions in design for manufacturing. :1-9.

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