Publications

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Journal Articles
Vishnoi A, Kryazhimskiy S, Bazykin GA, Hannenhalli S, Plotkin JB.  2010.  Young Proteins Experience More Variable Selection Pressures Than Old Proteins. Genome ResearchGenome Res.. 20(11):1574-1581.
Hotho A, Sure Y, Getoor L.  2004.  A workshop report: mining for and from the Semantic Web at KDD 2004. SIGKDD Explor. Newsl.. 6(2):142-143.
Housley R, Arbaugh WA.  2003.  WLAN problems and solutions. Communications of the ACM. 46(5):31-34.
Istrail S, Sutton GG, Florea L, Halpern AL, Mobarry CM, Lippert R, Walenz B, Shatkay H, Dew I, Miller JR et al..  2004.  Whole-genome shotgun assembly and comparison of human genome assemblies. Proceedings of the National Academy of Sciences of the United States of America. 101(7):1916-1916.
Ricaldi JN, Fouts DE, Selengut JD, Harkins DM, Patra KP, Moreno A, Lehmann JS, Purushe J, Sanka R, Torres M et al..  2012.  Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity.. PLoS Negl Trop Dis. 6(10):e1853.
Plaisant C, Carr DA, Hasegawa H.  1992.  When an Intermediate View Matters a 2D-browser Experiment. Institute for Systems Research Technical Reports.
Jutla A, Akanda AShafqat, Huq A, Faruque ASyed Golam, Colwell RR, Islam S.  2013.  A water marker monitored by satellites to predict seasonal endemic cholera. Remote Sensing Letters. 4472741982394456(8):822-831.
Han B, Zhu Y, Comaniciu D, Davis LS.  2009.  Visual Tracking by Continuous Density Propagation in Sequential Bayesian Filtering Framework. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 31(5):919-930.
Davis LS, Fejes S, Harwood D, Yacoob Y, Hariatoglu I, Black M.  1997.  Visual surveillance of human activity. Computer Vision—ACCV'98. :267-274.
Davis LS, Fejes S, Harwood D, Yacoob Y, Hariatoglu I, Black M.  1997.  Visual surveillance of human activity. Computer Vision—ACCV'98. :267-274.
Hochheiser H, Shneiderman B.  2001.  Visual specification of queries for finding patterns in time-series data. Proceedings of discovery science. :441-446.
Revelle G, Druin A, Platner M, Bederson BB, Hourcade JP, Sherman L.  2002.  A visual search tool for early elementary science students. Journal of Science Education and Technology. 11(1):49-57.
Hochheiser H, Shneiderman B.  2002.  Visual queries for finding patterns in time series data. University of Maryland, Computer Science Dept. Tech Report, CS-TR-4365.
Hossain M, Alam M, Khaleque A, Islam S, Sadique A, Khan N, Halim Z, Sarker M, El-Sayed NM, Huq A et al..  2018.  Virulence-Related Genes Identified from the Genome Sequence of the Non-O1/Non-O139 Vibrio cholerae Strain VcN1, Isolated from Dhaka, Bangladesh. Genome Announcements. (10)
Hossain M, Alam M, Khaleque A, Islam S, Sadique A, Khan N, Halim Z, Sarker M, El-Sayed NM, Huq A et al..  2018.  Virulence-Related Genes Identified from the Genome Sequence of the Non-O1/Non-O139 Vibrio cholerae Strain VcN1, Isolated from Dhaka, Bangladesh. Genome Announcements. (10)
Hossain M, Alam M, Khaleque A, Islam S, Sadique A, Khan N, Halim Z, Sarker M, El-Sayed NM, Huq A et al..  2018.  Virulence-Related Genes Identified from the Genome Sequence of the Non-O1/Non-O139 Vibrio cholerae Strain VcN1, Isolated from Dhaka, Bangladesh. Genome Announcements. (10)
Hoban S, desJardins M, Farrell N, Rathod P, Sachs J, Sansare S, Yesha Y, Keating J, Busschots B, Means J et al..  2002.  Virtual Telescopes in Education. Journal of Digital Information. 2(4)
Hicks MW, Foster JS.  2010.  Viewpoint Adapting agile software development methodology toward more efficient management of academic research groups.. Communications of the ACM. 53(10):30-30.
Binsztein N, Costagliola MC, Pichel M, Jurquiza V, Ramírez FC, Akselman R, Vacchino M, Huq A, Colwell RR.  2004.  Viable but Nonculturable Vibrio Cholerae O1 in the Aquatic Environment of Argentina. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 70(12):7481-7486.
Alam M, Sultana M, Nair GB, Siddique AK, Hasan NA, Sack RB, Sack DA, Ahmed KU, Sadique A, Watanabe H et al..  2007.  Viable but nonculturable Vibrio cholerae O1 in biofilms in the aquatic environment and their role in cholera transmission. Proceedings of the National Academy of Sciences. 104(45):17801-17801.
Swamy N, Hicks MW.  2009.  Verified enforcement of stateful information release policies. SIGPLAN Not.. 43(12):21-31.
Swamy N, Hicks MW.  2008.  Verified enforcement of automaton-based information release policies. Proceedings of the 2008 Workshop on Programming Languages and Analysis for Security. ACM Press.
Kembhavi A, Harwood D, Davis LS.  2011.  Vehicle Detection Using Partial Least Squares. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 33(6):1250-1265.
Minkah N, Hwang Y, Perry K, Van Duyne GD, Hendrickson R, Lefkowitz EJ, Hannenhalli S, Bushman FD.  2007.  Variola virus topoisomerase: DNA cleavage specificity and distribution of sites in Poxvirus genomes. Virology. 365(1):60-69.
Minkah N, Hwang Y, Perry K, Van Duyne GD, Hendrickson R, Lefkowitz EJ, Hannenhalli S, Bushman FD.  2007.  Variola virus topoisomerase: DNA cleavage specificity and distribution of sites in Poxvirus genomes. Virology. 365(1):60-69.

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