Publications

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Journal Articles
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
Stantchev G, Juba D, Dorland W, Varshney A.  2007.  Plasma Turbulence Simulation and Visualization on Graphics Processors: Efficient Parallel Computing on the Desktop. Bulletin of the American Physical Society. Volume 52, Number 11
Bader DA, Helman DR, JaJa JF.  1996.  Practical parallel algorithms for personalized communication and integer sorting. Journal of Experimental Algorithmics (JEA). 1
Louis VR, Russek-Cohen E, Choopun N, Rivera ING, Gangle B, Jiang SC, Rubin A, Patz JA, Huq A, Colwell RR.  2003.  Predictability of Vibrio Cholerae in Chesapeake Bay. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 69(5):2773-2785.
Colwell RR, Unnikrishnan A, Jutla A, Huq A, Akanda A.  2015.  Predictive Time Series Analysis Linking Bengal Cholera with Terrestrial Water Storage Measured from Gravity Recovery and Climate Experiment Sensors. The American Journal of Tropical Medicine and Hygiene. 93(6):1179-1186.
Basri R, Jacobs DW.  2001.  Projective alignment with regions. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 23(5):519-527.
Cantet F, Hervio-Heath D, Caro A, Le Mennec C, Monteil C, Quéméré C, Jolivet-Gougeon A, Colwell RR, Monfort P.  2013.  Quantification of Vibrio parahaemolyticus, Vibrio vulnificus and Vibrio cholerae in French Mediterranean coastal lagoons. Research in Microbiology. 164(8):867-874.
Eckman B, Deutsch K, Janer M, Lacroix Z, Raschid L.  2003.  A query language to support scientific discovery. Proc. 2nd IEEE International Computer Society.
Helman DR, Bader DA, JaJa JF.  1998.  A Randomized Parallel Sorting Algorithm with an Experimental Study. Journal of Parallel and Distributed Computing. 52(1):1-23.
Esteves K, Hervio-Heath D, Mosser T, Rodier C, Tournoud M-G, Jumas-Bilak E, Colwell RR, Monfort P.  2015.  Rapid Proliferation of Vibrio parahaemolyticus, Vibrio vulnificus, and Vibrio cholerae during Freshwater Flash Floods in French Mediterranean Coastal Lagoons. Applied and Environmental Microbiology. (21):7600-7609.
Basri R, Jacobs DW.  1997.  Recognition using region correspondences. International Journal of Computer Vision. 25(2):145-166.
Zhuolin Jiang, Lin Z, Davis LS.  2012.  Recognizing Human Actions by Learning and Matching Shape-Motion Prototype Trees. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 34(3):533-547.
Grossman D, Morrisett G, Jim T, Hicks MW, Wang Y, Cheney J.  2002.  Region-based memory management in cyclone. SIGPLAN Not.. 37(5):282-293.
Fredrickson GN, JaJa JF.  1982.  On the relationship between the biconnectivity augmentation and traveling salesman problem. Theoretical Computer Science. 19(2):189-201.
Aris A, Shneiderman B, Plaisant C, Shmueli G, Jank W.  2005.  Representing Unevenly-Spaced Time Series Data for Visualization and Interactive Exploration (2005). Institute for Systems Research Technical Reports.
Jacobs DW.  1996.  Robust and efficient detection of salient convex groups. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 18(1):23-37.
Yu Z, Seng CY, Jiang T, Wu X, Arbaugh WA.  2005.  Robust routing in malicious environment for ad hoc networks. Information Security Practice and Experience. :36-47.
Ji H, Fermüller C.  2009.  Robust Wavelet-Based Super-Resolution Reconstruction: Theory and Algorithm. IEEE Transactions on Pattern Analysis and Machine Intelligence. 31(4):649-660.
Liu Z, Jacobs DW, Basri R.  1999.  The role of convexity in perceptual completion: beyond good continuation. Vision Research. 39(25):4244-4257.
JaJa JF, Wu SA.  1989.  On routing two-terminal nets in the presence of obstacles. Computer-Aided Design of Integrated Circuits and Systems, IEEE Transactions on. 8(5):563-570.
Hicks MW, Morrisett G, Grossman D, Jim T.  2003.  Safe and flexible memory management in Cyclone. Technical Reports from UMIACS.
Swamy N, Hicks MW, Morrisett G, Grossman D, Jim T.  2006.  Safe manual memory management in Cyclone. Science of Computer Programming. 62(2):122-144.
Jutla A, Aldaach H, Billian H, Akanda A, Huq A, Colwell RR.  2015.  Satellite Based Assessment of Hydroclimatic Conditions Related to Cholera in Zimbabwe. PLOS ONE. (9Suppl 1):e0137828.

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