Publications

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Journal Articles
Louis VR, Russek-Cohen E, Choopun N, Rivera ING, Gangle B, Jiang SC, Rubin A, Patz JA, Huq A, Colwell RR.  2003.  Predictability of Vibrio Cholerae in Chesapeake Bay. Applied and Environmental MicrobiologyAppl. Environ. Microbiol.. 69(5):2773-2785.
Bhat G, Cleaveland R, L\üttgen G.  1999.  A practical approach to implementing real-time semantics. Annals of Software Engineering. 7(1):127-155.
Bhattacharjee B, Calvert K, Griffioen J, Spring N, Sterbenz JPG.  2006.  Postmodern internetwork architecture. ITTC-FY2006-TR-45030-01, Information and Telecommunication Center, The University of Kansas.
Yue Z, Chellappa R.  2005.  Pose-normalized view synthesis from silhouettes. IEEE Intl. Conf. on Acoustics, Speech, and Signal Processing (ICASSP).
Yue Z, Chellappa R.  2004.  Pose-normailzed view synthesis of a symmetric object using a single image. Proceedings of the 6th Asian Conference on Computer Vision (ACCV'04). :915-920.
Yue Z, Zhao W, Chellappa R.  2007.  Pose-Encoded Spherical Harmonics for Face Recognition and Synthesis Using a Single Image. EURASIP Journal on Advances in Signal Processing. 2008(1):748483-748483.
Chellappa R, Aggarwal G.  2008.  Pose and Illumination Issues in Face-and Gait-Based Identification. Advances in Biometrics. :307-322.
Espeland EM, Lipp EK, Huq A, Colwell RR.  2004.  Polylysogeny and prophage induction by secondary infection in Vibrio cholerae. Environmental Microbiology. 6(7):760-763.
Cummings MP, Welschmeyer NA.  1998.  Pigment composition of putatively achlorophyllous angiosperms. Plant Syst Evol. 210(1-2):105-111.
Campos A, Cummings MP, Reyes JL, Laclette JP.  1998.  Phylogenetic relationships of platyhelminthes based on 18S ribosomal gene sequences. Mol Phylogenet Evol. 10(1):1-10.
Campos A, Cummings MP, Reyes JL, Laclette JP.  1998.  Phylogenetic relationships of platyhelminthes based on 18S ribosomal gene sequences. Mol Phylogenet Evol. 10(1):1-10.
Förster H, Cummings MP, Coffey MD.  2000.  Phylogenetic relationships of ıt Phytophthora species based on ribosomal ITS I DNA sequence analysis with emphasis on Waterhouse groups V and VI. Mycol Res. 104:1055-1061.
Förster H, Cummings MP, Coffey MD.  2000.  Phylogenetic relationships of ıt Phytophthora species based on ribosomal ITS I DNA sequence analysis with emphasis on Waterhouse groups V and VI. Mycol Res. 104:1055-1061.
García-Varela M, Pérez-Ponce de León G, de la Torre P, Cummings MP, Sarma SS, Laclette JP.  2000.  Phylogenetic relationships of Acanthocephala based on analysis of 18S ribosomal RNA gene sequences. J Mol Evol. 50(6):532-540.
Eng KH, Corrada Bravo H, Keleş S.  2009.  A phylogenetic mixture model for the evolution of gene expression. Molecular biology and evolution. 26(10):2363-2363.
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
Cummings MP, Nugent JM, Olmstead RG, Palmer JD.  2003.  Phylogenetic analysis reveals five independent transfers of the chloroplast gene ıt rbcL to the mitochondrial genome in angiosperms. Curr Genet. 43(2):131-138.
García-Varela M, Cummings MP, Pérez-Ponce de León G, Gardner SL, Laclette JP.  2002.  Phylogenetic analysis based on 18S ribosomal RNA gene sequences supports the existence of class Polyacanthocephala (Acanthocephala). Mol Phylogenet Evol. 23(2):288-292.
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Caceres A, Shang F, Wawrousek E, Liu Q, Avidan O, Cvekl A, Yang Y, Haririnia A, Storaska A, Fushman D et al..  2010.  Perturbing the Ubiquitin Pathway Reveals How Mitosis Is Hijacked to Denucleate and Regulate Cell Proliferation and Differentiation In Vivo. PLoS ONEPLoS ONE. 5(10):e13331-e13331.
Caceres A, Shang F, Wawrousek E, Liu Q, Avidan O, Cvekl A, Yang Y, Haririnia A, Storaska A, Fushman D et al..  2010.  Perturbing the Ubiquitin Pathway Reveals How Mitosis Is Hijacked to Denucleate and Regulate Cell Proliferation and Differentiation In Vivo. PLoS ONEPLoS ONE. 5(10):e13331-e13331.
Chalidabhongse TH, Kim K, Harwood D, Davis LS.  2003.  A perturbation method for evaluating background subtraction algorithms. Joint IEEE International Workshop on Visual Surveillance and Performance Evaluation of Tracking and Surveillance (VS-PETS).
Chang XC, Paige CC, Stewart G.W.  1997.  Perturbation analysis for the QR decomposition. SIAM Journal on Matrix Analysis and Applications. 18:775-791.

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