Publications

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2016
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
Choi SY, Rashed SM, Hasan NA, Alam M, Islam T, Sadique A, Johura F-T, Eppinger M, Ravel J, Huq A et al..  2016.  Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008. mBio. 7(2)
Phelps C, Madhavan G, Rappuoli R, LEVIN SCOTT, Shortlife E, Colwell RR.  2016.  Strategic Planning in Population Health and Public Health Practice: A Call to Action for Higher Education. The Milbank Quarterly. 94906033(143S2):109-125.
2015
Castro-Nallar E, Hasan NA, Cebula TA, Colwell RR, Robison RA, W. Johnson E, Crandall KA.  2015.  Concordance and discordance of sequence survey methods for molecular epidemiology. PeerJ. (8105394):e761.
Hasan NA, Grim CJ, Lipp EK, Rivera ING, Chun J, Haley BJ, Taviani E, Choi SYoung, Hoq M, A. Munk C et al..  2015.  Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
Klinzing DC, Choi SYoung, Hasan NA, Matias RR, Tayag E, Geronimo J, Skowronski E, Rashed SM, Kawashima K, C. Rosenzweig N et al..  2015.  Hybrid Vibrio cholerae El Tor Lacking SXT Identified as the Cause of a Cholera Outbreak in the Philippines. mBio. (2)
Klinzing DC, Choi SYoung, Hasan NA, Matias RR, Tayag E, Geronimo J, Skowronski E, Rashed SM, Kawashima K, C. Rosenzweig N et al..  2015.  Hybrid Vibrio cholerae El Tor Lacking SXT Identified as the Cause of a Cholera Outbreak in the Philippines. mBio. (2)
Rahaman M.Habibur, Islam T, Colwell RR, Alam M.  2015.  Molecular tools in understanding the evolution of Vibrio cholerae. Frontiers in Microbiology. (e0120311154e00398-13822020380817190)
Ceccarelli D, Chen A, Hasan NA, Rashed SM, Huq A, Colwell RR.  2015.  Non-O1/Non-O139 Vibrio cholerae Carrying Multiple Virulence Factors and V. cholerae O1 in the Chesapeake Bay, Maryland. Applied and Environmental Microbiology. (631):1909-1918.
Hasan NA, Rezayat T, Blatz PJ, Choi SYoung, Griffitt KJ, Rashed SM, Huq A, Conger NG, Colwell RR, D. Grimes J.  2015.  Nontoxigenic Vibrio cholerae Non-O1/O139 Isolate from a Case of Human Gastroenteritis in the U.S. Gulf Coast. Journal of Clinical Microbiology. (1):9-14.
Hasan NA, Rezayat T, Blatz PJ, Choi SYoung, Griffitt KJ, Rashed SM, Huq A, Conger NG, Colwell RR, D. Grimes J.  2015.  Nontoxigenic Vibrio cholerae Non-O1/O139 Isolate from a Case of Human Gastroenteritis in the U.S. Gulf Coast. Journal of Clinical Microbiology. (1):9-14.
Esteves K, Hervio-Heath D, Mosser T, Rodier C, Tournoud M-G, Jumas-Bilak E, Colwell RR, Monfort P.  2015.  Rapid Proliferation of Vibrio parahaemolyticus, Vibrio vulnificus, and Vibrio cholerae during Freshwater Flash Floods in French Mediterranean Coastal Lagoons. Applied and Environmental Microbiology. (21):7600-7609.
Alivisatos A.P, Blaser M.J, Brodie E.L, Chun M., Dangl J.L, Donohue T.J, Dorrestein P.C, Gilbert J.A, Green J.L, Jansson J.K et al..  2015.  A unified initiative to harness Earth's microbiomes. Science. (62607551614341176):507-508.
2014
Alam M, Rashed SM, Bin Mannan S, Islam T, Lizarraga-Partida ML, Delgado G, Morales-Espinosa R, Mendez JLuis, Navarro A, Watanabe H et al..  2014.  Occurrence in Mexico, 1998–2008, of Vibrio cholerae CTX + El Tor carrying an additional truncated CTX prophage. Proceedings of the National Academy of Sciences. 111(27):9917-9922.
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
2013
Dachman-Soled D, Malkin T, Raykova M, Venkitasubramaniam M.  2013.  Adaptive and Concurrent Secure Computation from New Adaptive, Non-malleable Commitments. Advances in Cryptology - ASIACRYPT 2013. :316-336.
Preston ND, Daszak P, Colwell RR.  2013.  Current Topics in Microbiology and Immunology One Health: The Human-Animal-Environment Interfaces in Emerging Infectious Diseases The Human Environment Interface: Applying Ecosystem Concepts to Health. 365:83-100.
Rashid A, Haley BJ, Rajabov M, Ahmadova S, Gurbanov S, Colwell RR, Huq A.  2013.  Detection of Vibrio cholerae in environmental waters including drinking water reservoirs of Azerbaijan. Environmental Microbiology Reports. (1):30-38.
Rashid A, Haley BJ, Rajabov M, Ahmadova S, Gurbanov S, Colwell RR, Huq A.  2013.  Detection of Vibrio cholerae in environmental waters including drinking water reservoirs of Azerbaijan. Environmental Microbiology Reports. (1):30-38.
Nguyen V-A, Boyd-Graber J, Resnik P.  2013.  Lexical and Hierarchical Topic Regression. :1106-1114.
Nguyen V-A, Boyd-Graber J, Resnik P, Cai DA, Midberry JE, Wang Y.  2013.  Modeling topic control to detect influence in conversations using nonparametric topic models. Machine Learning. :1-41.
Li I, Froehlich J, Larsen JE, Grevet C, Ramirez E.  2013.  Personal informatics in the wild: hacking habits for health & happiness. CHI '13 Extended Abstracts on Human Factors in Computing Systems. :3179-3182.
Haft DH, Selengut JD, Richter RA, Harkins D, Basu MK, Beck E.  2013.  TIGRFAMs and Genome Properties in 2013.. Nucleic Acids Res. 41(Database issue):D387-95.
2012
Roy A, Halder B, Garain U, Doermann D.  2012.  Automatic Authentication of Banknotes. IEEE Transactions on Information Forensics & Security.
Ayres DL, Darling A, Zwickl DJ, Beerli P, Holder MT, Lewis PO, Huelsenbeck JP, Ronquist F, Swofford DL, Cummings MP et al..  2012.  BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Systematic BiologySyst Biol. 61(1):170-173.

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